Galaxy-ELIXIR webinars: Advanced Features
Date: 3 - 24 March 2021
Galaxy is supported by a large and active community distributed across the globe, which leads to rapid developments in every release. However, many of this features remain unknown by most of the users.
With this series of four webinars, the global Galaxy community will present such advanced features, touching upon workflows, data processing and management, interoperability and interactive tools, among others. (This is independent of the Galaxy Webinar Series.)
These events will run between 3 and 24 March 2021 and will be chaired by Hans-Rudolf Hotz.
Programme
3 March: Advanced Galaxy workflow features
3 March 2021, 17.00-18.00 CET (starts at 16.00 GMT, 11.00 EST, 8.00 PST)
The first webinar will cover recent Advanced Galaxy workflow features, from parameter sweeping to automatic reports:
Workflow-parameters
Invocations
Workflow-reports
Speakers:
Marius van der Beek
Aysam Guerler
Register
10 March: Processing thousands of datasets simultaneously
10 March 2021, 17.00-18.00 CET (starts at 16.00 GMT, 11.00 EST, 8.00 PST)
Processing thousands of datasets simultaneously: From SRA/ENA import and metadata annotation to parallel processing
Collections
Advanced collection features (tags, rule-builder, etc.)
Speakers:
Wolfgang Maier
Anton Nekrutenko
Register
17 March: Bridging two worlds
17 March 2021, 17.00-18.00 CET (starts at 16.00 GMT, 11.00 EST, 8.00 PST)
Jupyter Notebooks and RStudio in combination with Galaxy workflows
Interactive tools and Galaxy communication with other projects
Speakers:
Daniel Blankenberg
Bérénice Batut
Register
24 March: Speed up your data analysis with Galaxy: Features no one knows about
24 March 2021, 17.00-18.00 CET (starts at 16.00 GMT, 11.00 EST, 8.00 PST)
Speed up your data analysis with Galaxy: Features no one knows about
User-preference options
Data privacy, collaboration, and sharing options
Your-own-reference genome
Restart tools and workflows
Visualisations
Speakers:
Jennifer Hillman-Jackson
Anika Erxleben
Register
Acknowledgement
The analyses have been performed using the Galaxy platform and open source tools from BioConda. Tools were run using XSEDE resources maintained by the Texas Advanced Computing Center (TACC ), Pittsburgh Supercomputing Center (PSC), and Indiana University in the U.S., de.NBI, VSC cloud resources and IFB cluster resources on the European side, STFC-IRIS at the Diamond Light Source, and ARDC cloud resources in Australia.
Activity log