Events - TeSS Sandbox (Training eSupport System)

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- European Bioinformatics Institute (EBI)27
- ELIXIR Slovenia18
- Australian BioCommons11
- ELIXIR Portugal10
- ELIXIR-SI eLearning Platform (EeLP)6
- ELIXIR5
- NBIS4
- BioExcel3
- Galaxy Project3
- INB: Spanish National Bioinformatics Institute3
- ELIXIR: The Czech Republic Node2
- SciLifeLab2
- Software Carpentry2
- University of Cambridge Bioinformatics Training2
- ELIXIR Norway1
- FAIRDOM1
- Foundation for Research & Technology Hellas / Institute of Chemical Engineering Sciences (FORTH/ICE-HT)1
- IFB French Institute of Bioinformatics1
- Jalview1
- NORBIS, the Norwegian national research school in bioinformatics, biostatistics and systems biology1
- Swiss Institute of Bioinformatics1
- Thermo Fisher Scientific1
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- HDRUK27
- EeLP26
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- DMP4
- Metabolomics4
- Software Carpentry4
- TtT4
- Unix/Linux4
- Workflows4
- data stewardship4
- Assembly3
- Data analysis3
- Data carpentry3
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- Docker3
- Genomics3
- Open science3
- Rare Diseases3
- Registry3
- Training3
- Variant calling3
- data organisation3
- data publication3
- ethical issues3
- high-performance computing3
- metadata3
- storage3
- Bioconductor2
- CWL2
- Containers2
- Course design2
- Course development2
- Data Visualization2
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- Educational psychology2
- FAIR principles2
- Galaxy2
- Gene Expression2
- Genetic Variation2
- R2
- Shell2
- Shell script2
- SoftwareCarpentry2
- Teaching2
- TtT, Train the Trainer, Educational psychology, cognitive science, teaching practices 2
- Unix Shell2
- assembly2
- computational methods2
- computer-science2
- data quality2
- genome annotation2
- machine learning2
- omics data2
- open access2
- pedagogy2
- sustainability2
- teaching practices2
- DSW1
- Metabolomics1
- Pre-processing1
- RNA-Seq1
- Statistics1
- metabolic modelling, Genome, open-source software platform1
- ATAC-seq1
- Ab initio models1
- All Hands1
- Apollo1
- Bayesian inference1
- Biological databases1
- Biomarker Conference1
- Biomarker Conference 20171
- Biomarkers Conference 20171
- Biomarkers Conferences1
- Biomarkers Conferences USA1
- Biomarkers Congress USA1
- Biopharmaceuticals1
- C13 Labeling Fluxomics1
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- Chimera1
- Clinical Bioinformatics1
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- ClinicalPharmacology1
- CoARA1
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- Computer Programming1
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- Curriculum development, course design, learning outcomes, Bloom's Taxonomy, assessment, course evaluation, training trainers, training material1
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- Scientific topic
- Bioinformatics22
- Cloud computing18
- Computer science18
- Exomes18
- Genome annotation18
- Genomes18
- Genomics18
- HPC18
- High performance computing18
- High-performance computing18
- Personal genomics18
- Synthetic genomics18
- Viral genomics18
- Whole genomes18
- Data management17
- Metadata management17
- Research data management (RDM)17
- MicroRNA sequencing5
- RNA sequencing5
- RNA-Seq5
- RNA-Seq analysis5
- Small RNA sequencing5
- Small RNA-Seq5
- Small-Seq5
- Transcriptome profiling5
- WTSS5
- Whole transcriptome shotgun sequencing5
- miRNA-seq5
- Active learning4
- Bayesian methods4
- Biostatistics4
- Data archival4
- Data archiving4
- Data curation4
- Data curation and archival4
- Data preservation4
- Data rendering4
- Data visualisation4
- Database curation4
- Descriptive statistics4
- Ensembl learning4
- FAIR data4
- Findable, accessible, interoperable, reusable data4
- Gaussian processes4
- Inferential statistics4
- Kernel methods4
- Knowledge representation4
- Machine learning4
- Markov processes4
- Multivariate statistics4
- Neural networks4
- Pipelines4
- Probabilistic graphical model4
- Probability4
- Recommender system4
- Reinforcement learning4
- Research data archiving4
- Software integration4
- Statistics4
- Statistics and probability4
- Supervised learning4
- Tool integration4
- Tool interoperability4
- Unsupervised learning4
- Workflows4
- Codon usage3
- DNA chips3
- DNA microarrays3
- Exometabolomics3
- Expression3
- Gene expression3
- Gene expression profiling3
- Gene transcription3
- Gene translation3
- LC-MS-based metabolomics3
- MS-based metabolomics3
- MS-based targeted metabolomics3
- MS-based untargeted metabolomics3
- Mass spectrometry-based metabolomics3
- Metabolites3
- Metabolome3
- Metabolomics3
- Metabonomics3
- NMR-based metabolomics3
- Transcription3
- Biomathematics2
- Chromosome walking2
- Clone verification2
- Comparative modelling2
- Comparative transcriptomics2
- Computational biology2
- DNA variation2
- DNA-Seq2
- DNase-Seq2
- Data analysis2
- Data architecture2
- Data architecture, analysis and design2
- Data design2
- Docking2
- Genetic variation2
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- Operation
- Data handling8
- File handling8
- File processing8
- Processing8
- Report handling8
- Utility operation8
- Allele calling3
- Data analysis3
- Data brokering3
- Data deposition3
- Data deposition brokering3
- Data formatting3
- Data reformatting3
- Data submission3
- Data visualisation3
- Database deposition3
- Database submission3
- Exome variant detection3
- File format conversion3
- File formatting3
- File reformatting3
- Format conversion3
- Genome variant detection3
- Germ line variant calling3
- Molecular visualisation3
- Mutation detection3
- Plotting3
- Rendering3
- Somatic variant calling3
- Variant calling3
- Variant mapping3
- Visualisation3
- de novo mutation detection3
- Data filtering2
- File format validation2
- Format validation2
- Sequence filtering2
- rRNA filtering2
- Biological pathway analysis1
- Biological pathway modelling1
- Biological pathway prediction1
- Breakend assembly1
- Classification1
- Clustering1
- Database search1
- Expectation maximisation1
- Functional clustering1
- Functional genome annotation1
- Functional pathway analysis1
- Functional sequence clustering1
- Genome annotation1
- Genome assembly1
- Genomic assembly1
- Gibbs sampling1
- Hypothesis testing1
- Metagenome annotation1
- Omnibus test1
- Pathway analysis1
- Pathway comparison1
- Pathway modelling1
- Pathway prediction1
- Pathway simulation1
- Principal component analysis1
- Search1
- Sequence assembly (genome assembly)1
- Significance testing1
- Statistical analysis1
- Statistical calculation1
- Statistical test1
- Statistical testing1
- Structural genome annotation1
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- Tool
- Data Stewardship Wizard2
- European Nucleotide Archive (ENA)2
- Ontology Lookup Service2
- Gromacs1
- HADDOCK web portal1
- Open PHACTS API1
- TESS1
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- Field
- BIOLOGICAL SCIENCES2
- EARTH SCIENCES1
- MEDICAL AND HEALTH SCIENCES1
- Social and Community Informatics1
- TECHNOLOGY1
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- Event type
- Workshops and courses144
- Meetings and conferences7
- Awards and prizegivings1
- Receptions and networking1
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- Venue
- European Bioinformatics Institute (EMBL-EBI) - Training Room 112
- European Bioinformatics Institute (EMBL-EBI) - Training Room 28
- European Bioinformatics Institute (EMBL-EBI)6
- University of Ljubljana, Faculty of Medicine6
- Australia2
- Institute of Organic Chemistry and Biochemistry AS CR, 2, Flemingovo náměstí2
- Instituto Gulbenkian de Ciência (IGC), 6, Rua Quinta Grande2
- Leuven2
- University of Milano Bicocca2
- University of Minho - Campus of Gualtar, Rua da Universidade2
- Uppsala University, SciLifeLab, BMC, Husargatan 3, Uppsala2
- Via Pietro Castellino, 1112
- 180 chemin de Tournefeuille1
- Adriatico Guest House - Denardo Lecture Hall International Centre for Theoretical Physics Trieste, Italy1
- Alvisse Parc Hotel****, 120, Route d'Echternach1
- Auditorium 2005 (the Linux classroom), Narva mnt 18 (UT Delta Centre)1
- CCMAR - Center of Marine Sciences1
- Campus di Fisciano, Università degli Studi di Salerno, Via Giovanni Paolo II, n. 1321
- Campus di Fisciano, Università di Salerno1
- Cancer Research UK Cambridge Institute1
- Centro Nacional de Investigaciones Oncológicas, 3, Calle de Melchor Fernández Almagro1
- Champalimaud Foundation, Avenida Brasília1
- Cirad, 389, Avenue Agropolis1
- Computational and Data Driven Science1
- Dipartimento di Scienze Biochimiche - Alessandro Rossi Fanelli, 332, Viale Regina Elena1
- Earlham Institute (EI), Colney Lane1
- Escuela Técnica Superior de Ingeniería Informática, 35, Bulevar Louis Pasteur1
- European Molecular Biology Laboratory1
- European Molecular Biology Laboratory, 1, Meyerhofstraße1
- Faculty of Law, University of Ljubljana, Poljanski nasip 21
- Feinberg Room B1
- Fondazione Edmund Mach, Palazzo della Ricerca e della Conoscenza, Via E. Mach 1, San Michele all'Adige1
- Gaustadalléen 23, 23, Gaustadalléen1
- Hilton Atlanta Airport, 1031, Virginia Avenue1
- Hotel Berlin Berlin, 17, Lützowplatz1
- INRA, URGI, Bat 18 Route de SaintCyr RD101
- ITQB NOVA, Avenida da República1
- Instituto Gulbenkian de Ciência1
- Instituto de Medicina Molecular (IMM), Avenida Professor Egas Moniz1
- Institutt for pedagogikk og lærerutdanning (Faculty of Humanities), Teorifagbygget-Hus 11
- Kilburn Building, Oxford Road1
- Luxembourg Learning Centre University of Luxembourg1
- Luxembourg Learning Centre, University of Luxembourg1
- MSTC, Sherrington Building, University of Liverpool1
- Melbourne1
- Online1
- Online via Zoom1
- Onsite on three different locations across Sweden where the Swedish national Research Infrastructures, MaxIV, SciLifeLab and ESS are coming together to deliver a course on structural biology. The course will be held in Sweden, on site, between Aug 22 and Sept 2nd 2022. *Lund, 22 to 25 Aug *Gothenburg, 26 Aug *Stockholm, 29 Aug to 2 Sep1
- Pathologie Universitätsspital Basel, 40, Schönbeinstrasse1
- Rikli Balance Hotel, Cankarjeva cesta 4, SI-4260 Bled, Slovenia1
- Stavros Niarchos Foundation Cultural Center, 364, Leoforos Andrea Siggrou1
- Technická 3, 3, Technická1
- Thermo Fisher Scientific 129, Frankfurter Straße Darmstadt D-642931
- University Campus Bohunice, Masaryk University, Brno, Czech Republic1
- University Place, University of Manchester1
- University of Cambridge, Trinity Ln1
- University of Dundee, Nethergate1
- University of Liverpool1
- University of Ljubljana, Faculty of Medicine, Institute for Biostatistics and Medical Informatics, Vrazov Trg 2, SI-1000, Ljubljana, Slovenia1
- University of Ljubljana, Faculty of Medicine, Vrazov trg 2, SI-1000 Ljubljana, Slovenia1
- University of Milano-Bicocca, Building U7, Lab 7151
- University of Paris-Sud, 15, Rue Georges Clemenceau1
- University of Tromsø1
- Università degli Studi di Padova - Campus di Biologia e Biomedicina "Fiore di Botta", 8, Via del Pescarotto1
- Università degli Studi di Padova - Casa della Gioventù, Via Rio Bianco,121
- Uppsala SLU1
- V Sadech 1/1, 1, V Sadech1
- Via Bicocca degli Arcimboldi, 8, Lab. 715, U7 Building1
- Via Giano della Bella, 341
- Via Giovanni Amendola, 1221
- Via Nizza, 52 Molecular Biotechonology Center, University of Turin1
- Via Pietro Castellino, 111, 111, Via Pietro Castellino1
- Via dei Tizii, 6B1
- Virtual Event1
- online1
- p.le Aldo Moro 71
- “ATHENA” Research Center (ATHENA RC) Artemidos 6 & Epidavrou 15125, Marousi, GR1
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- City
- Cambridge27
- Ljubljana9
- Oeiras4
- Prague4
- Roma4
- Napoli3
- Uppsala3
- Athens2
- Braga2
- Fisciano2
- Leuven2
- Liverpool2
- Manchester2
- Milano2
- Norwich2
- Tromsø2
- Atlanta1
- Bari1
- Basel1
- Belval1
- Berlin1
- Bled1
- Bradford1
- Brno1
- Darmstadt1
- Dundee1
- Esch-sur-Alzette1
- Faro1
- Grignano1
- Heidelberg1
- Lisboa1
- Lisbon1
- Lund, Gothenburg, Stockholm1
- Luxembourg1
- Madrid1
- Melbourne1
- Milan1
- Montferrier-sur-Lez (Montpellier area)1
- Málaga1
- Orsay1
- Oslo1
- Padova1
- Rehovot1
- San Michele all'Adige1
- Tartu1
- Torino1
- Toulouse1
- Versailles1
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- Country
- United Kingdom35
- Italy17
- Australia11
- Slovenia10
- Portugal9
- Czechia4
- France4
- Sweden4
- Germany3
- Luxembourg3
- Norway3
- Belgium2
- Greece2
- Spain2
- Czech Republic1
- Estonia1
- Israel1
- Sverige1
- Switzerland1
- United States of America1
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- Sponsor
- ELIXIR Italy3
- RDA-Portugal3
- ELIXIR2
- ELIXIR EXCELERATE2
- ELIXIR Training Platform2
- ELIXIR-CONVERGE2
- CCMAR1
- UALG1
- Center for Experimental and Clinical Imaging Technologies Zurich (EXCITE Zurich)1
- Centre for Digital Life Norway1
- Data & Software Carpentry1
- ELIXIR 1
- ELIXIR Converge1
- ELIXIR Norway1
- ELIXIR-FR/IFB1
- EMBO1
- EMBO Courses and Workshops1
- EU1
- EXCELERATE1
- Elixir Belgium1
- Elixir Italy1
- European Union1
- Genotoul1
- HPC Carpentry1
- INB/ELIXIR-ES1
- INRA1
- INTERREG V-A Italy-Slovenia 2014-2020 project TRAIN1
- ISCIII1
- MetaboHUB1
- NBIS - National Bioinformatics Infrastructure Sweden1
- NORBIS1
- National Research Council of Italy1
- RFMF1
- The Carpentries1
- This InfraLife integrative structural biology course is organized with funding support from the Swedish research council, Lif, Excillum, NBIS, Xenocs, SwedNMR, Bruker and CryoNET.1
- University of Dundee1
- de.NBI1
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- Target audience
- PhD students39
- Researchers37
- Life Science Researchers18
- life scientists16
- Master students13
- Biologists9
- Technicians7
- bioinformaticians7
- PhD candidates5
- Undergraduate students5
- Bioinformaticians4
- Trainers4
- database managers4
- Anyone who wants to become a teacher / trainer or a better one3
- Clinicians3
- Core Facility Managers3
- PhD Students3
- Postdoctoral Researchers3
- Professors3
- Training Designers3
- Training instructors3
- Wet-lab Researchers3
- data stewards3
- healthcare professionals3
- medical specialists3
- post-docs3
- postdoctoral researchers3
- registry curators3
- teachers3
- rare disease patients representatives2
- Bench biologists2
- Bioinformaticians and wet-lab biologists2
- Biologists with little or no prior computational experience2
- Biologists, Genomicists, Computer Scientists2
- Graduate Students2
- Industry2
- Principal Investigators2
- Scientists2
- beginner bioinformaticians2
- data managers2
- teachers / trainers2
- Researchers in Life Sciences1
- Academia1
- Academics1
- Any students, postdocs or RAs with an interest in HPC1
- Associate Professors1
- Beginners in statistics1
- Bioinformatician, Bioanalysts1
- Bioinformaticians and Biologists who want to learn how to manipulate, process data, and make plots using R1
- Bioinformaticians and wet-lab biologists who can program1
- Bioinformatics beginners 1
- Biomedical researchers1
- Biotechnology Companies1
- Business Entrepreneurs1
- Bussiness Professionals1
- Chemists1
- Clinical Scientists1
- Computational biologists1
- DevOps in any field1
- Developers1
- Early Career Researcher1
- Educators1
- Evolutionary Biologists1
- Experimental Researchers1
- Experts1
- Graduate students1
- HPC users1
- Mainly graduate students and Junior post-docs, of either experimental or computational background, with basic training in life sciences, or (bio)chemistry, or physics, or mathematics, or engineering1
- Members of ELIXIR-UK consortium member institutions working on ELIXIR-related projects 1
- Participants are expected to be familiar with Linux and scripting1
- People from any area with little or no prior computational experience1
- PhD Scholars, Graduates and Post Graduates, Professors, Associate Professors, Assistant Professors, Bio instruments Professionals, Bio-informatics Professionals, Directors, CEO’s of Organizations, Supply Chain companies, Manufacturing Companies, Software development companies, Research Institutes and members1
- PhD Students or young researchers in molecular biology and/or genetics with little or no background in bioinformatics. 1
- PhD and graduate students, young researchers and PIs in the life science and computational biology field1
- PhD students and young researchers in the life science and computational biology field who are planning to use RNA-seq data and are looking for the best practices to analyze these types of data1
- Pharmaceutical Industry1
- Post Docs1
- Post-Docs1
- Post-Doctoral Fellows1
- Post-docs1
- Postgraduate students1
- Professionals involved in personalized molecular oncology, including laboratory managers, biologists, bioinformaticians, pathologists, geneticists, clinicians and pharmaceutical company employees.1
- Research scientists1
- Researchers with an interest in metabolomics and its applications1
- TeSS community1
- Technologists1
- The course is open to scientists of all age from academia, health care and industry. Level approximately corresponding to PhD student or postdoc depending on experience. Applicants welcome from Sweden, the Nordics, and other countries.1
- This course is intended for master and PhD students, post-docs and staff scientists familiar with different omics data technologies who are interested in applying machine learning to analyse these data. No prior knowledge of Machine Learning concepts and methods is expected nor required1
- anyone1
- biological data analysts1
- data steward / data manager1
- everyone who is interested in learning to use metabolic modelling in their research, using user-friendly tools. No programming skills are required.1
- evolutionary biologists who already have bioinformatics skills. PhD students and Post-Doc researchers will benefit the most out of this course, but applications from all candidates will be evaluated in their context1
- postdocs1
- principle investigators1
- rare disease patients representatives1
- research software engineers and research data managers working with ELIXIR-supported tools and resources1
- students1
- trainers1
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- Eligibility
- Registration of interest
- First come first served178
- By invitation15
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- Language
- English1
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- Node
- Italy33
- EMBL-EBI27
- Slovenia26
- Sweden18
- Portugal16
- United Kingdom13
- France11
- Norway11
- Netherlands9
- Switzerland8
- Czech Republic7
- Spain7
- Belgium6
- Greece6
- Germany4
- Luxembourg4
- Finland3
- Estonia2
- Israel1
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- Testing 1231
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