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Workshops and courses
Analysing publications and funding with the Europe PMC REST API
24 November 2021 @ 09:00 - 17:00
Online
Literature search Europe PubMed Central Literature (literature) API Programmatic access REST Funding -
Workshops and courses
The BioImage Archive: Home for life sciences microscopy data
1 December 2021 @ 09:00 - 17:00
Online
Image Image metadata Bioimaging Imaging Microscope image visualisation BioImage Archive -
Workshops and courses
Biomedicine, supercomputers and simulations: in silico experiments and its applications in cancer research
14 December 2021 @ 09:00 - 17:00
Online
Metabolic network modelling Systems biology Cell-level simulations Personalised medicine PerMedCoE -
Workshops and courses
Logic modelling of signalling networks – CellNOpt and CARNIVAL
20 January 2022 @ 09:00 - 17:00
Online
Metabolic network modelling Systems biology Cell-level simulations Personalised medicine PerMedCoE Signaling networks -
Workshops and courses
Guide to exploring genes and genomes with Ensembl
26 January 2022 @ 09:00 - 17:00
Online
Genome visualisation Genome map Ensembl Genome -
Workshops and courses
MetaboLights: the home for metabolomics experiments and derived information
2 February 2022 @ 09:00 - 17:00
Online
Metabolomics MetaboLights: Metabolomics repository and reference database -
Workshops and courses
Exploring genotype-phenotype data using the GWAS Catalog
9 February 2022 @ 09:00 - 17:00
Online
NHGRI-EBI GWAS Catalog Phenotype Genome-Wide Association Studies -
Workshops and courses
Social Media in Science Communication
17 February 2022 @ 09:00 - 17:00
Online
Data integration Advances in spatial omics RNA FISH Spatial multi-omics BioImage Archive Single cell Spatial transcriptomics Tissue biology Cell-cell interactions Cell signalling cell-cell communication cell-cell interaction single-cells Scientific communication Scientific presentation Data presentation Research presentation Protein Data Bank in Europe Ensembl UniProt: The Universal Protein Resource AlphaFold Database Proteins (proteins) DNA & RNA (dna-rna) Variant prediction Fermentation Microbial ecosystems webinar Antimicrobial resistance BLAST Open Targets Platform Cross domain (cross-domain) Chemical biology (chemical-biology) Drug discovery Drug target identification UniRule ARBA Automated annotation MetaboLights: Metabolomics repository and reference database Chemical Entities of Biological Interest ChEBI Metabolites Molecular building blocks of life Human Cell Atlas Data Coordination Platform Single-cell transcriptomics HCA data portal Programmatic access API Python Complex Portal macromolecular assembly InterPro Boolean modelling Europe PubMed Central Literature (literature) Open access Protein Data Bank in Europe - Knowledge Base 3D structure DeepMind Artificial intelligence AI Structure prediction cancer Boolean Ensembl Genomes European Nucleotide Archive Data archive Raw sequencing data RNAcentral Non-coding RNA ncRNA GPU Data protection Job dispatcher Bioimage analysis resource Accessibility Missense variation Biostatistics Rfam non-coding RNA Infernal software Sequence annotation Root microbiome Abiotic stress land management Plant genotype Plant webinar series HPC database development cross-linked databases Plant database data infrastructure Plant breeding Data standards data managemnet data sharing Hyb-Seq method Flowering plants Crop improvement Pangenomics Pangenomes Virtual humans Drug-target identification plant-microbe interactions Plant research Drug targets Machine learning Mathematical modelling plant science plant-environment interaction Phenotyping field phenotyping Deep phenotyping EOSC-Life NHGRI-EBI GWAS Catalog clinical data genome-wide association plants European Variation Archive EVA Variant clusters Variant data annotation Constraint-based metabolic modelling UniProt knowledgebase protein variant impact disease-associated protein variants Bioethics FAIR principles ELSI cohort data translational research BioModels database Mathematical modeling Reproducibity Systems biology models workflows federated analysis polygenic risk scores IntAct Molecular Interaction Database PSICQUIC IMEx Complex portal Agent-based modelling Macrophages Tumorigenesis Training (Training) On-demand teaching introduction Building blocks Data analysis COSMIC Cancer mutation Somatic mutation ChEMBL: Bioactive data for drug discovery Chemical compounds drug-like molecules Chemogenomics Biocurator Programming Data management Green Algorithms Open data Environmental impact Carbon footprint HPC workflows Orchestrator Gene expression (gene-expression) Chemosensitivity assay Experimental protocols Drug screening MICHA European Genome-phenome Archive EGA restricted access UniProt Introduction UniProtKB Proteome genes Introductory GDPR Data security Expression Atlas Pfam protein sequence search Domain architecture Protein taxonomy AI structure prediction COVID-19 Coronavirus COVID-19 Data Portal Virology Computational simulations Signalling prior knowledge Cancer therapy response PRIDE: The Proteomics Identifications Database protein structure prediction AI system Competency framework Publication Journal club Preprints Aggregated view Structural similarity PPI networks Cell signaling Malaria Biological networks Graph theory Building biological networks Biocuration Information Manager Industry Rare-variant Variant association SKAT Sensitive data Human cohort data FAIR Gene Ontology International Mouse Phenotyping Consortium Portal Biocurators biocuration programming skills training career development Cell-level simulations Personalised medicine PerMedCoE -
Workshops and courses
Exploring Gene Ontology, GO annotations, tools and resources
2 March 2022 @ 09:00 - 17:00
Online
Data integration Advances in spatial omics RNA FISH Spatial multi-omics BioImage Archive Single cell Spatial transcriptomics Tissue biology Cell-cell interactions Cell signalling cell-cell communication cell-cell interaction single-cells Scientific communication Scientific presentation Data presentation Research presentation Protein Data Bank in Europe Ensembl UniProt: The Universal Protein Resource AlphaFold Database Proteins (proteins) DNA & RNA (dna-rna) Variant prediction Fermentation Microbial ecosystems webinar Antimicrobial resistance BLAST Open Targets Platform Cross domain (cross-domain) Chemical biology (chemical-biology) Drug discovery Drug target identification UniRule ARBA Automated annotation MetaboLights: Metabolomics repository and reference database Chemical Entities of Biological Interest ChEBI Metabolites Molecular building blocks of life Human Cell Atlas Data Coordination Platform Single-cell transcriptomics HCA data portal Programmatic access API Python Complex Portal macromolecular assembly InterPro Boolean modelling Europe PubMed Central Literature (literature) Open access Protein Data Bank in Europe - Knowledge Base 3D structure DeepMind Artificial intelligence AI Structure prediction cancer Boolean Ensembl Genomes European Nucleotide Archive Data archive Raw sequencing data RNAcentral Non-coding RNA ncRNA GPU Data protection Job dispatcher Bioimage analysis resource Accessibility Missense variation Biostatistics Rfam non-coding RNA Infernal software Sequence annotation Root microbiome Abiotic stress land management Plant genotype Plant webinar series HPC database development cross-linked databases Plant database data infrastructure Plant breeding Data standards data managemnet data sharing Hyb-Seq method Flowering plants Crop improvement Pangenomics Pangenomes Virtual humans Drug-target identification plant-microbe interactions Plant research Drug targets Machine learning Mathematical modelling plant science plant-environment interaction Phenotyping field phenotyping Deep phenotyping EOSC-Life NHGRI-EBI GWAS Catalog clinical data genome-wide association plants European Variation Archive EVA Variant clusters Variant data annotation Constraint-based metabolic modelling UniProt knowledgebase protein variant impact disease-associated protein variants Bioethics FAIR principles ELSI cohort data translational research BioModels database Mathematical modeling Reproducibity Systems biology models workflows federated analysis polygenic risk scores IntAct Molecular Interaction Database PSICQUIC IMEx Complex portal Agent-based modelling Macrophages Tumorigenesis Training (Training) On-demand teaching introduction Building blocks Data analysis COSMIC Cancer mutation Somatic mutation ChEMBL: Bioactive data for drug discovery Chemical compounds drug-like molecules Chemogenomics Biocurator Programming Data management Green Algorithms Open data Environmental impact Carbon footprint HPC workflows Orchestrator Gene expression (gene-expression) Chemosensitivity assay Experimental protocols Drug screening MICHA European Genome-phenome Archive EGA restricted access UniProt Introduction UniProtKB Proteome genes Introductory GDPR Data security Expression Atlas Pfam protein sequence search Domain architecture Protein taxonomy AI structure prediction COVID-19 Coronavirus COVID-19 Data Portal Virology Computational simulations Signalling prior knowledge Cancer therapy response PRIDE: The Proteomics Identifications Database protein structure prediction AI system Competency framework Publication Journal club Preprints Aggregated view Structural similarity PPI networks Cell signaling Malaria Biological networks Graph theory Building biological networks Biocuration Information Manager Industry Rare-variant Variant association SKAT Sensitive data Human cohort data FAIR Gene Ontology International Mouse Phenotyping Consortium Portal Biocurators biocuration programming skills training career development Cell-level simulations Personalised medicine PerMedCoE -
Workshops and courses
Identifying tumor cells at the single cell level through machine learning
3 March 2022 @ 09:00 - 17:00
Online
Metabolic network modelling Systems biology Machine learning Cell-level simulations Personalised medicine PerMedCoE Single cell
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