RNA-seq Analysis 2014 Module 3 - Expression and Differential Expression

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Get FPKM style expression estimates using Cufflinks

        Perform differential expression analysis with Cuffdiff

        Perform summary analysis with CummeRbund

        Downstream interpretation of expression analysis (multiple testing, clustering, heatmaps, classification, pathway analysis, etc.)

 

Keywords: Differential expression, Transript expression

Target audience: Biologists, Genomicists, Computer Scientists, Graduate Students, Post-Doctoral Fellows, Researchers

Authors: Michelle Brazas

Remote created date: 2014-06-27

Remote updated date: 2017-10-09

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