Please note: This instance is for testing/development, and any content submitted may be changed or deleted without warning.
Training eSupport System
  • Log In
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Trainers
    • Providers
    • Nodes

TeSS makes use of some necessary cookies to provide its core functionality.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Scientific topic
    • Algorithms8
    • Bottom-up proteomics8
    • Computer programming8
    • Data structures8
    • Discovery proteomics8
    • MS-based targeted proteomics8
    • MS-based untargeted proteomics8
    • Metaproteomics8
    • Peptide identification8
    • Programming languages8
    • Protein and peptide identification8
    • Proteomics8
    • Quantitative proteomics8
    • Software development8
    • Software engineering8
    • Targeted proteomics8
    • Top-down proteomics8
    • Assembly6
    • Sequence assembly6
    • Exomes5
    • Genome annotation5
    • Genomes5
    • Genomics5
    • Personal genomics5
    • Synthetic genomics5
    • Viral genomics5
    • Whole genomes5
    • DNA variation4
    • Genetic variation4
    • Genomic variation4
    • Mutation4
    • Polymorphism4
    • Proteogenomics4
    • Somatic mutations4
    • Antimicrobial stewardship3
    • Biodiversity3
    • Medical microbiology3
    • Microbial genetics3
    • Microbial physiology3
    • Microbial surveillance3
    • Microbiological surveillance3
    • Microbiology3
    • Molecular infection biology3
    • Molecular microbiology3
    • Taxonomy3
    • Biological sequences2
    • Community analysis2
    • Environmental microbiology2
    • Metagenomics2
    • Metatranscriptomics2
    • Microbial ecology2
    • Microbiome2
    • Molecular community analysis2
    • Sequence analysis2
    • Sequence databases2
    • Shotgun metagenomics2
    • 3C technologies1
    • 3C-based methods1
    • Chromatin accessibility1
    • Chromatin accessibility assay1
    • Chromosome conformation analysis1
    • Chromosome conformation capture1
    • Comparative genomics1
    • Comparative transcriptomics1
    • DNA polymorphism1
    • Gene and protein families1
    • Gene families1
    • Gene family1
    • Gene system1
    • Genes, gene family or system1
    • Microsatellites1
    • Phylogenetic clocks1
    • Phylogenetic dating1
    • Phylogenetic simulation1
    • Phylogenetic stratigraphy1
    • Phylogeny1
    • Phylogeny reconstruction1
    • Protein families1
    • Protein sequence classification1
    • RFLP1
    • SNP1
    • Single nucleotide polymorphism1
    • Transcriptome1
    • Transcriptomics1
    • VNTR1
    • Variable number of tandem repeat polymorphism1
    • snps1
    • Show N_FILTERS more
    • Tool
    • Galaxy21
    • BWA5
    • FreeBayes4
    • BEDTools3
    • fastp3
    • lofreq3
    • Bwa-mem22
    • FastQC2
    • MultiQC2
    • QUAST2
    • SAMtools2
    • SRA Software Toolkit2
    • Unipept2
    • Vcflib2
    • metaQuantome2
    • msConvert2
    • snpEff2
    • BLAST1
    • BUSCO1
    • BamTools1
    • Biopython1
    • Circos1
    • Cutadapt1
    • Diamond1
    • EncyclopeDIA1
    • FlashLFQ1
    • GEMINI1
    • Galactic Circos1
    • GenomeScope 2.01
    • HISAT21
    • MAFFT1
    • Merqury1
    • Minimap21
    • RapidNJ1
    • SALSA1
    • StringTie1
    • Unicycler1
    • bed to protein map1
    • bx-python1
    • compute_sequence_length1
    • customProDB1
    • gfastats1
    • gffcompare1
    • mzToSQLite1
    • orfipy1
    • purge_dups1
    • Show N_FILTERS more
    • Content provider
    • Galaxy Training35
    • Show N_FILTERS more
    • Keyword
    • Foundations of Data Science8
    • Proteomics8
    • microgalaxy8
    • Assembly5
    • jupyter-notebook5
    • Introduction to Galaxy Analyses4
    • Using Galaxy and Managing your Data4
    • Variant Analysis4
    • biodiversity4
    • prokaryote4
    • eukaryote3
    • proteogenomics3
    • VGP2
    • collections2
    • pacbio2
    • DIA1
    • Genome Annotation1
    • Transcriptomics1
    • annotation1
    • cookbook1
    • covid191
    • evolution1
    • gmod1
    • jbrowse11
    • one-health1
    • vgp1
    • virology1
    • Show N_FILTERS more
    • Difficulty level
    • Beginner24
    • Intermediate10
    • Advanced1
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International35
    • Show N_FILTERS more
    • Target audience
    • Students35
    • Show N_FILTERS more
    • Author
    • Anton Nekrutenko
    • Timothy J. Griffin
    • Helena Rasche113
    • SIB Swiss Institute of Bioinformatics104
    • Bérénice Batut90
    • Saskia Hiltemann55
    • Björn Grüning38
    • bebatut27
    • Anthony Bretaudeau26
    • bgruening25
    • Subina Mehta24
    • The Carpentries23
    • Yvan Le Bras22
    • Fotis E. Psomopoulos21
    • Michelle Brazas21
    • Simon Gladman21
    • Nicola Soranzo20
    • Wandrille Duchemin20
    • Nate Coraor19
    • Bazante Sanders18
    • Katarzyna Kamieniecka18
    • Krzysztof Poterlowicz18
    • Terri Attwood18
    • Wendi Bacon18
    • Marie Josse17
    • The Gulbenkian Training Programme in Bioinformatics17
    • Anne Fouilloux16
    • Mehmet Tekman15
    • Maria Doyle14
    • Martin Morgan14
    • Donny Vrins13
    • Geert van Geest13
    • James Johnson13
    • Julia Jakiela13
    • Katherine Do13
    • Patricia Palagi13
    • Wolfgang Maier13
    • shiltemann13
    • Cristóbal Gallardo12
    • Egon Willighagen12
    • Simon Andrews12
    • Simon Bray12
    • nekrut12
    • Anup Kumar11
    • Celia van Gelder11
    • Delphine Lariviere11
    • Khaled Jum'ah11
    • Mathieu Bourgey11
    • Melanie Föll11
    • Pratik Jagtap11
    • Dave Clements10
    • Lucille Delisle10
    • Mijke Jetten10
    • Paul Yorke10
    • Pavankumar Videm10
    • Daniel Blankenberg9
    • David Wishart9
    • Jared Simpson9
    • John Chilton9
    • Marius van den Beek9
    • allegra.via Via9
    • Allegra Via8
    • Anika Erxleben8
    • Avans Hogeschool8
    • Boris Steipe8
    • Elisabeth Gasteiger8
    • Helen Brown8
    • Malachi Griffith8
    • Maria Levchenko8
    • Matthias Fahrner8
    • Paul Zierep8
    • Robin Engler8
    • Stéphanie Robin8
    • Alex Ostrovsky7
    • Alexander Botzki7
    • Alexandre Cormier7
    • Anne Pajon7
    • Erwan Corre7
    • Florian Christoph Sigloch7
    • Joachim Wolff7
    • Kaivan Kamali7
    • Korbinian Bösl7
    • Laura Cooper7
    • Laura Leroi7
    • Martin Čech7
    • Michael Charleston7
    • Personalized Health Informatics Group7
    • Praveen Kumar7
    • Robert Andrews7
    • Sergio Martínez Cuesta7
    • pajanne7
    • stortebecker7
    • Andrew Mason6
    • Anna Syme6
    • Branka Franicevic6
    • Christopher Barnett6
    • Coline Royaux6
    • Dayane Araujo6
    • ELIXIR Goblet Train the Trainers6
    • Eija Korpelainen6
    • Show N_FILTERS more
    • Contributor
    • Saskia Hiltemann32
    • Björn Grüning30
    • Helena Rasche28
    • Bérénice Batut20
    • Nicola Soranzo17
    • Anton Nekrutenko14
    • Niall Beard13
    • William Durand10
    • Subina Mehta8
    • Melanie Föll7
    • Anthony Bretaudeau5
    • Cristóbal Gallardo4
    • Delphine Lariviere4
    • Maria Doyle4
    • Teresa Müller4
    • Armin Dadras3
    • Dave Clements3
    • Gildas Le Corguillé3
    • Mallory Freeberg3
    • Marius van den Beek3
    • Mélanie Petera3
    • Nate Coraor3
    • Anna Syme2
    • Linelle Abueg2
    • Lucille Delisle2
    • Wolfgang Maier2
    • Ahmed Hamid Awan1
    • Alex Ostrovsky1
    • Alexandre Cormier1
    • Beatriz Serrano-Solano1
    • Daniela Schneider1
    • David López1
    • Deepti Varshney1
    • Donny Vrins1
    • Ekaterina Polkh1
    • Enis Afgan1
    • James Johnson1
    • John Davis1
    • Martin Čech1
    • Mateo Boudet1
    • Matthias Bernt1
    • Mehmet Tekman1
    • Nic Herndon1
    • Pavankumar Videm1
    • TheKharleeci1
    • Vijay1
    • Show N_FILTERS more
    • Resource type
    • e-learning33
    • slides2
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets25
    • Associated Workflows18
    • Quarto/RMarkdown Notebook9
    • Jupyter Notebook (with Solutions)5
    • Jupyter Notebook (without Solutions)5
    • collections1
    • Show N_FILTERS more
  • Show disabled materials
  • Show archived materials
    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month

Training materials

  • Subscribe via email

Email Subscription

Register training material

Authors: Anton Nekrutenko or Timothy J. Griffin

35 materials found
  • e-learning

    Multisample Analysis

    ••• advanced
    Using Galaxy and Managing your Data collections
  • e-learning

    Proteogenomics 3: Novel peptide analysis

    •• intermediate
    Proteomics proteogenomics
  • e-learning

    metaQuantome 2: Function

    •• intermediate
    Proteomics Proteogenomics Metatranscriptomics Microbial ecology Metagenomics microgalaxy
  • e-learning

    metaQuantome 1: Data creation

    •• intermediate
    Proteomics Proteogenomics Biodiversity Taxonomy microgalaxy
  • e-learning

    metaQuantome 3: Taxonomy

    •• intermediate
    Proteomics Proteogenomics Metatranscriptomics Microbial ecology Metagenomics Taxonomy microgalaxy
  • e-learning

    Proteogenomics 1: Database Creation

    •• intermediate
    Proteomics proteogenomics
  • e-learning

    Proteogenomics 2: Database Search

    •• intermediate
    Proteomics proteogenomics
  • e-learning

    Metaproteomics tutorial

    • beginner
    Proteomics Proteogenomics Biodiversity Taxonomy microgalaxy
  • e-learning

    EncyclopeDIA

    • beginner
    Proteomics DIA
  • e-learning

    Introduction to sequencing with Python (part one)

    • beginner
    Software engineering Foundations of Data Science jupyter-notebook
  • 1
  • 2
  • 3
  • 4
Training eSupport System
contact@example.com
Contribute
About TeSS
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.0
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.