Training materials
-
e-learning
Introduction to Genomics and Galaxy
• beginnerIntroduction to Galaxy Analyses -
slides
Mapping
• beginnerSequence analysis
- 1
- 2
- Home
- Materials
Filter
Sort
-
-
Filter Clear filters
-
-
Scientific topic
- Assembly3
- Comparative transcriptomics3
- Sequence assembly3
- Transcriptome3
- Transcriptomics3
- Biodiversity2
- Biological sequences2
- Exomes2
- Genome annotation2
- Genomes2
- Genomics2
- Personal genomics2
- Sequence analysis2
- Sequence databases2
- Synthetic genomics2
- Viral genomics2
- Whole genomes2
- 3C technologies1
- 3C-based methods1
- Chromatin accessibility1
- Chromatin accessibility assay1
- Chromosome conformation analysis1
- Chromosome conformation capture1
- Community analysis1
- DNA metabarcoding1
- Environmental metabarcoding1
- Environmental microbiology1
- Metabarcoding1
- Metagenomics1
- Microbial ecology1
- Microbiome1
- Molecular community analysis1
- RNA metabarcoding1
- Shotgun metagenomics1
- Taxonomy1
- eDNA metabarcoding1
- eRNA metabarcoding1
- Show N_FILTERS more
-
-
-
Tool
- Galaxy11
- fastp3
- BUSCO2
- Bwa-mem22
- FastQC2
- GenomeScope 2.02
- IsoformSwitchAnalyzeR2
- Merqury2
- Minimap22
- MultiQC2
- PfamScan2
- QUAST2
- RSeQC2
- SAMtools2
- STAR2
- StringTie2
- gfastats2
- gffcompare2
- gffread2
- pyGenomeTracks2
- rnaQUAST2
- BEDTools1
- BamTools1
- Bandage1
- Biopython1
- Cutadapt1
- Diamond1
- Galactic Circos1
- JBrowse1
- SALSA1
- SCANPY1
- Salmon1
- Smudgeplots1
- Targetfinder.org1
- bx-python1
- kraken21
- miRDeep21
- purge_dups1
- taxonomy_krona_chart1
- Show N_FILTERS more
-
-
-
Content provider
- Galaxy Training12
- Show N_FILTERS more
-
-
-
Keyword
- plants4
- Assembly3
- Transcriptomics3
- biodiversity3
- VGP2
- eukaryote2
- pacbio2
- 16S1
- Contributing to the Galaxy Training Material1
- Introduction to Galaxy Analyses1
- Microbiome1
- QC1
- Sequence analysis1
- Single Cell1
- Visualisation1
- alternative splicing1
- animals1
- assembly1
- elixir1
- genome1
- isoform switching1
- metabarcoding1
- miRNA1
- microgalaxy1
- nanopore1
- paper-replication1
- stress tolerance1
- train-the-trainers1
- Show N_FILTERS more
-
-
-
Difficulty level
- Beginner8
- Intermediate3
- Advanced1
- Show N_FILTERS more
-
-
-
Target audience
- Students11
- Instructors1
- Show N_FILTERS more
-
-
-
Author
- Cristóbal Gallardo
- Helena Rasche113
- SIB Swiss Institute of Bioinformatics104
- Bérénice Batut90
- Saskia Hiltemann54
- Björn Grüning37
- Anton Nekrutenko27
- bebatut27
- Anthony Bretaudeau26
- bgruening25
- Subina Mehta24
- The Carpentries23
- Yvan Le Bras22
- Fotis E. Psomopoulos21
- Michelle Brazas21
- Simon Gladman21
- Nicola Soranzo20
- Wandrille Duchemin20
- Nate Coraor19
- Bazante Sanders18
- Katarzyna Kamieniecka18
- Krzysztof Poterlowicz18
- Terri Attwood18
- Wendi Bacon18
- Marie Josse17
- Anne Fouilloux16
- Mehmet Tekman15
- Martin Morgan14
- Donny Vrins13
- Geert van Geest13
- James Johnson13
- Julia Jakiela13
- Katherine Do13
- Maria Doyle13
- Wolfgang Maier13
- shiltemann13
- Simon Bray12
- nekrut12
- Anup Kumar11
- Delphine Lariviere11
- Khaled Jum'ah11
- Melanie Föll11
- Pratik Jagtap11
- Dave Clements10
- Lucille Delisle10
- Patricia Palagi10
- Pavankumar Videm10
- Daniel Blankenberg9
- John Chilton9
- Marius van den Beek9
- allegra.via Via9
- Anika Erxleben8
- Avans Hogeschool8
- Elisabeth Gasteiger8
- Paul Zierep8
- Robin Engler8
- Stéphanie Robin8
- Timothy J. Griffin8
- Alex Ostrovsky7
- Alexandre Cormier7
- Anne Pajon7
- Erwan Corre7
- Florian Christoph Sigloch7
- Joachim Wolff7
- Kaivan Kamali7
- Laura Cooper7
- Laura Leroi7
- Martin Čech7
- Matthias Fahrner7
- Michael Charleston7
- Paul Yorke7
- Praveen Kumar7
- Robert Andrews7
- pajanne7
- stortebecker7
- Allegra Via6
- Andrew Mason6
- Anna Syme6
- Branka Franicevic6
- Christopher Barnett6
- Coline Royaux6
- ELIXIR Goblet Train the Trainers6
- Emma Leith6
- Morgan Howells6
- Nadia Goué6
- Philippe Le Mercier6
- Philippe Rocca-Serra6
- Raphael Mourad6
- Sara Morsy6
- Valentin Loux6
- Xenia Perez Sitja6
- erxleben6
- joachimwolff6
- Aidan Budd5
- Beatriz Serrano-Solano5
- Clemens Blank5
- Dechen Bhuming5
- Gildas Le Corguillé5
- Hans-Rudolf Hotz5
- Janick Mathys5
- Show N_FILTERS more
-
-
-
Contributor
- Björn Grüning12
- Cristóbal Gallardo11
- Helena Rasche10
- Saskia Hiltemann10
- Bérénice Batut8
- Beatriz Serrano-Solano3
- Delphine Lariviere3
- Nate Coraor3
- Anna Syme2
- Anthony Bretaudeau2
- Anton Nekrutenko2
- Deepti Varshney2
- Linelle Abueg2
- Lucille Delisle2
- Niall Beard2
- Nicola Soranzo2
- Pavankumar Videm2
- Teresa Müller2
- Wendi Bacon2
- Wolfgang Maier2
- Anup Kumar1
- Dave Clements1
- Gildas Le Corguillé1
- Goodnews Sandy1
- Maria Doyle1
- Marius van den Beek1
- Mehmet Tekman1
- Peter van Heusden1
- Saim Momin1
- Sebastian Schaaf1
- Tom Brown1
- Willem de Koning1
- William Durand1
- Yvan Le Bras1
- Show N_FILTERS more
-
-
-
Resource type
- e-learning10
- slides2
- Show N_FILTERS more
-
- Show disabled materials
- Show archived materials