Training materials
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e-learning
Calculating α and β diversity from microbiome taxonomic data
• beginnerMetagenomics Microbial ecology Microbiome diversity metagenomics -
e-learning
PAPAA PI3K_OG: PanCancer Aberrant Pathway Activity Analysis
• beginnerStatistics and probability Machine learning Pan-cancer Statistics and machine learning cancer biomarkers oncogenes and tumor suppressor genes -
e-learning
Taxonomic Profiling and Visualization of Metagenomic Data
• beginnerMetagenomics Microbial ecology Taxonomy Sequence analysis Microbiome metagenomics microgalaxy taxonomic profiling -
e-learning
Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition
• beginnerMetagenomics Microbial ecology Public health and epidemiology Taxonomy Sequence assembly Pathology Sequence analysis Heatmap Microbiome Nanopore data analysis … -
e-learning
Text-mining with the SimText toolset
• beginnerStatistics and probability Statistics and machine learning interactive-tools -
e-learning
Pre-processing of 10X Single-Cell RNA Datasets
• beginner10x Single Cell -
e-learning
Machine Learning Modeling of Anticancer Peptides
•• intermediateProteomics ML cancer -
e-learning
Metatranscriptomics analysis using microbiome RNA-seq data (short)
• beginnerMetagenomics Microbial ecology Metatranscriptomics Taxonomy Function analysis Sequence analysis Microbiome metatranscriptomics microgalaxy -
e-learning
Creation of an interactive Galaxy tools table for your community
• beginnerSoftware engineering Community Galaxy Community Building SIG -
e-learning
From NCBI's Sequence Read Archive (SRA) to Galaxy: SARS-CoV-2 variant analysis
• beginnerGenetic variation Variant Analysis covid19 one-health virology
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