Please note: This instance is for testing/development, and any content submitted may be changed or deleted without warning.
Training eSupport System
  • Log In
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Trainers
    • Providers
    • Nodes

TeSS makes use of some necessary cookies to provide its core functionality.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Scientific topic
    • Exomes13
    • Genome annotation13
    • Genomes13
    • Genomics13
    • Personal genomics13
    • Synthetic genomics13
    • Viral genomics13
    • Whole genomes13
    • Bottom-up proteomics7
    • Discovery proteomics7
    • MS-based targeted proteomics7
    • MS-based untargeted proteomics7
    • Metaproteomics7
    • Peptide identification7
    • Protein and peptide identification7
    • Proteomics7
    • Quantitative proteomics7
    • Targeted proteomics7
    • Top-down proteomics7
    • Assembly5
    • Sequence assembly5
    • Algorithms4
    • Biodiversity4
    • Computer programming4
    • Data structures4
    • Programming languages4
    • Software development4
    • Software engineering4
    • Biological sequences3
    • Comparative transcriptomics3
    • Sequence analysis3
    • Sequence databases3
    • Transcriptome3
    • Transcriptomics3
    • Animal2
    • Animal biology2
    • Animal genetics2
    • Animal physiology2
    • Animals2
    • Botany2
    • Entomology2
    • Gene and protein families2
    • Gene families2
    • Gene family2
    • Gene system2
    • Genes, gene family or system2
    • Metazoa2
    • Plant2
    • Plant anatomy2
    • Plant biology2
    • Plant cell biology2
    • Plant ecology2
    • Plant genetics2
    • Plant physiology2
    • Plant science2
    • Plants2
    • Protein families2
    • Protein sequence classification2
    • Zoology2
    • Antimicrobial stewardship1
    • Data clean-up1
    • Data cleaning1
    • Data integrity1
    • Data quality1
    • Data quality management1
    • Function analysis1
    • Functional analysis1
    • Low complexity sequences1
    • Medical microbiology1
    • Microbial genetics1
    • Microbial physiology1
    • Microbial surveillance1
    • Microbiological surveillance1
    • Microbiology1
    • Molecular infection biology1
    • Molecular microbiology1
    • Nucleic acid repeats1
    • Protein function analysis1
    • Protein function prediction1
    • Protein repeats1
    • Protein sequence features1
    • Protein sequence repeats1
    • Protein sites, features and motifs1
    • Repeat sequences1
    • Sequence complexity1
    • Sequence composition1
    • Sequence composition, complexity and repeats1
    • Sequence repeats1
    • Signal peptide cleavage sites1
    • Show N_FILTERS more
    • Tool
    • Galaxy21
    • JBrowse7
    • BUSCO6
    • Apollo3
    • QUAST3
    • Cutadapt2
    • FASTQE2
    • FastQC2
    • InterProScan (EBI)2
    • Merqury2
    • NanoPlot2
    • OMArk2
    • STAR2
    • eggNOG-mapper v22
    • gffread2
    • pycoQC2
    • AUGUSTUS1
    • BEDTools1
    • BLAST1
    • Diamond1
    • Flye1
    • GAEVAL1
    • Helixer1
    • MAKER1
    • RED1
    • RepeatMasker1
    • RepeatModeler1
    • SNAP1
    • Trimmomatic1
    • Trinity1
    • UniProt1
    • WoLF PSORT1
    • funannotate1
    • msConvert1
    • Show N_FILTERS more
    • Content provider
    • Galaxy Training33
    • Show N_FILTERS more
    • Keyword
    • Genome Annotation12
    • biodiversity9
    • Proteomics7
    • jbrowse17
    • eukaryote6
    • gmod6
    • DDA5
    • Assembly4
    • Development in Galaxy3
    • Transcriptomics3
    • apollo23
    • HeLa2
    • Sequence analysis2
    • assembly2
    • eukaryota2
    • maker2
    • prokaryote2
    • work-in-progress2
    • Braker31
    • Galaxy Server administration1
    • Introduction to Galaxy Analyses1
    • SILAC1
    • ansible1
    • cyoa1
    • helixer1
    • human1
    • interactive-tools1
    • microgalaxy1
    • pacbio1
    • quality control1
    • Show N_FILTERS more
    • Difficulty level
    • Beginner18
    • Intermediate12
    • Advanced3
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International33
    • Show N_FILTERS more
    • Target audience
    • Students29
    • Galaxy Administrators4
    • Show N_FILTERS more
    • Author
    • Anthony Bretaudeau
    • Florian Christoph Sigloch
    • Helena Rasche113
    • SIB Swiss Institute of Bioinformatics104
    • Bérénice Batut90
    • Saskia Hiltemann54
    • Björn Grüning38
    • Anton Nekrutenko27
    • bebatut27
    • bgruening25
    • Subina Mehta24
    • The Carpentries23
    • Wandrille Duchemin22
    • Yvan Le Bras22
    • Fotis E. Psomopoulos21
    • Michelle Brazas21
    • Simon Gladman21
    • Nicola Soranzo20
    • Nate Coraor19
    • Bazante Sanders18
    • Katarzyna Kamieniecka18
    • Krzysztof Poterlowicz18
    • Terri Attwood18
    • Wendi Bacon18
    • Marie Josse17
    • The Gulbenkian Training Programme in Bioinformatics17
    • Anne Fouilloux16
    • Mehmet Tekman15
    • Maria Doyle14
    • Martin Morgan14
    • Donny Vrins13
    • Geert van Geest13
    • James Johnson13
    • Julia Jakiela13
    • Katherine Do13
    • Patricia Palagi13
    • Wolfgang Maier13
    • shiltemann13
    • Cristóbal Gallardo12
    • Egon Willighagen12
    • Simon Andrews12
    • Simon Bray12
    • nekrut12
    • Anup Kumar11
    • Celia van Gelder11
    • Delphine Lariviere11
    • Khaled Jum'ah11
    • Mathieu Bourgey11
    • Melanie Föll11
    • Pratik Jagtap11
    • Dave Clements10
    • Lucille Delisle10
    • Mijke Jetten10
    • Paul Yorke10
    • Pavankumar Videm10
    • Daniel Blankenberg9
    • David Wishart9
    • Jared Simpson9
    • John Chilton9
    • Marius van den Beek9
    • allegra.via Via9
    • Allegra Via8
    • Anika Erxleben8
    • Avans Hogeschool8
    • Boris Steipe8
    • Elisabeth Gasteiger8
    • Helen Brown8
    • Malachi Griffith8
    • Maria Levchenko8
    • Matthias Fahrner8
    • Paul Zierep8
    • Robin Engler8
    • Stéphanie Robin8
    • Timothy J. Griffin8
    • Alex Ostrovsky7
    • Alexander Botzki7
    • Alexandre Cormier7
    • Anne Pajon7
    • Erwan Corre7
    • Joachim Wolff7
    • Kaivan Kamali7
    • Korbinian Bösl7
    • Laura Cooper7
    • Laura Leroi7
    • Martin Čech7
    • Michael Charleston7
    • Personalized Health Informatics Group7
    • Praveen Kumar7
    • Robert Andrews7
    • Sergio Martínez Cuesta7
    • pajanne7
    • stortebecker7
    • Andrew Mason6
    • Anna Syme6
    • Branka Franicevic6
    • Christopher Barnett6
    • Coline Royaux6
    • Dayane Araujo6
    • ELIXIR Goblet Train the Trainers6
    • Eija Korpelainen6
    • Show N_FILTERS more
    • Contributor
    • Saskia Hiltemann31
    • Helena Rasche30
    • Björn Grüning26
    • Bérénice Batut25
    • Anthony Bretaudeau20
    • Nicola Soranzo14
    • Cristóbal Gallardo11
    • Niall Beard10
    • Armin Dadras8
    • Martin Čech8
    • William Durand8
    • Melanie Föll7
    • Florian Christoph Sigloch6
    • Alexandre Cormier5
    • Simon Bray5
    • Stéphanie Robin5
    • Clemens Blank4
    • Gildas Le Corguillé4
    • Jonathan Kreplak2
    • Laura Leroi2
    • Mateo Boudet2
    • Romane LIBOUBAN2
    • Solenne Correard2
    • Subina Mehta2
    • Swathi Nataraj2
    • Xavier Garnier2
    • Alaa-Elghamry1
    • Anika Erxleben1
    • Anne Fouilloux1
    • Anton Nekrutenko1
    • Anup Kumar1
    • Dave Clements1
    • Deepti Varshney1
    • Erwan Corre1
    • Felicitas Kindel1
    • Gianmauro Cuccuru1
    • Jasper Ouwerkerk1
    • José Manuel Domínguez1
    • Lucille Delisle1
    • Maria Doyle1
    • Marius van den Beek1
    • Matthias Bernt1
    • Natalie Kucher1
    • Nate Coraor1
    • Simon Gladman1
    • Teresa Müller1
    • Tomas Klingström1
    • Wolfgang Maier1
    • Show N_FILTERS more
    • Resource type
    • e-learning23
    • slides10
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets25
    • Associated Workflows21
    • Quarto/RMarkdown Notebook9
    • DDA1
    • ansible1
    • apollo21
    • gmod1
    • interactive-tools1
    • work-in-progress1
    • Show N_FILTERS more
  • Show disabled materials
  • Show archived materials
    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month

Training materials

  • Subscribe via email

Email Subscription

Register training material

Authors: Florian Christoph Sigloch or Anthony Bretaudeau

33 materials found
  • e-learning

    Genome annotation with Braker3

    •• intermediate
    Genomics Sequence assembly Biodiversity Zoology Plant biology Braker3 Genome Annotation biodiversity eukaryota jbrowse1
  • e-learning

    Genome annotation with Helixer

    •• intermediate
    Genomics Biodiversity Zoology Plant biology Genome Annotation biodiversity eukaryota helixer jbrowse1
  • e-learning

    Genome Assembly Quality Control

    •• intermediate
    Sequence assembly Biodiversity Data quality management Assembly assembly biodiversity quality control
  • e-learning

    Peptide and Protein Quantification via Stable Isotope Labelling (SIL)

    ••• advanced
    Proteomics DDA SILAC
  • e-learning

    Label-free versus Labelled - How to Choose Your Quantitation Method

    • beginner
    Proteomics DDA
  • e-learning

    Protein FASTA Database Handling

    • beginner
    Proteomics DDA
  • e-learning

    Peptide and Protein ID using OpenMS tools

    ••• advanced
    Proteomics DDA HeLa
  • e-learning

    Peptide and Protein ID using SearchGUI and PeptideShaker

    • beginner
    Proteomics DDA HeLa
  • e-learning

    Secretome Prediction

    •• intermediate
    Proteomics human work-in-progress
  • e-learning

    Masking repeats with RepeatMasker

    • beginner
    Genomics Sequence composition, complexity and repeats Genome Annotation biodiversity eukaryote
  • 1
  • 2
  • 3
  • 4
Training eSupport System
contact@example.com
Contribute
About TeSS
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.0
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.