Training materials
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e-learning
CRISPR screen analysis
• beginnerGenomics CRISPR Genome Annotation cell line essential genes genome editing -
e-learning
Using Workflow Parameters
•• intermediateUsing Galaxy and Managing your Data workflows -
e-learning
1: RNA-Seq reads to counts
• beginnerTranscriptomics QC collections mouse -
e-learning
Visualization of RNA-Seq results with Volcano Plot in R
•• intermediateTranscriptomics interactive-tools -
e-learning
2: RNA-seq counts to genes
• beginnerTranscriptomics QC limma-voom mouse -
e-learning
3: RNA-seq genes to pathways
• beginnerTranscriptomics mouse -
e-learning
Use Apptainer containers for running Galaxy jobs
• beginnerGalaxy Server administration ansible git-gat jobs -
e-learning
Monitoring Galaxy and Pulsar with Sentry
• beginnerGalaxy Server administration ansible git-gat -
e-learning
Creating, Editing and Importing Galaxy Workflows
•• intermediateUsing Galaxy and Managing your Data workflows -
e-learning
From NCBI's Sequence Read Archive (SRA) to Galaxy: SARS-CoV-2 variant analysis
• beginnerGenetic variation Variant Analysis covid19 one-health virology