Training materials
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e-learning
Bulk matrix to ESet | Creating the bulk RNA-seq dataset for deconvolution
• beginnerSingle Cell data management transcriptomics -
e-learning
Matrix Exchange Format to ESet | Creating a single-cell RNA-seq reference dataset for deconvolution
• beginnerSingle Cell data management -
e-learning
Using Workflow Parameters
•• intermediateUsing Galaxy and Managing your Data workflows -
e-learning
Inferring single cell trajectories with Scanpy
• beginnerMIGHTS Single Cell paper-replication -
e-learning
Pre-processing of 10X Single-Cell RNA Datasets
• beginner10x Single Cell -
e-learning
Bulk RNA Deconvolution with MuSiC
• beginnerSingle Cell transcriptomics -
e-learning
Comparing inferred cell compositions using MuSiC deconvolution
• beginnerSingle Cell transcriptomics -
e-learning
Analysis of plant scRNA-Seq Data with Scanpy
• beginnerSingle Cell paper-replication plants -
e-learning
Inferring single cell trajectories with Scanpy (Python)
• beginnerMIGHTS Single Cell jupyter-notebook paper-replication -
e-learning
Monitoring Galaxy and Pulsar with Sentry
• beginnerGalaxy Server administration ansible git-gat