Please note: This instance is for testing/development, and any content submitted may be changed or deleted without warning.
Training eSupport System
  • Log In
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Trainers
    • Providers
    • Nodes

TeSS makes use of some necessary cookies to provide its core functionality.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Scientific topic
    • Assembly3
    • Sequence assembly3
    • Exomes2
    • Genome annotation2
    • Genomes2
    • Genomics2
    • Personal genomics2
    • Synthetic genomics2
    • Viral genomics2
    • Whole genomes2
    • 3C technologies1
    • 3C-based methods1
    • Algorithms1
    • Antimicrobial stewardship1
    • Biodiversity1
    • Biological sequences1
    • Chromatin accessibility1
    • Chromatin accessibility assay1
    • Chromosome conformation analysis1
    • Chromosome conformation capture1
    • Computer programming1
    • DNA polymorphism1
    • DNA variation1
    • Data structures1
    • Genetic variation1
    • Genomic variation1
    • Medical microbiology1
    • Microbial genetics1
    • Microbial physiology1
    • Microbial surveillance1
    • Microbiological surveillance1
    • Microbiology1
    • Microsatellites1
    • Molecular infection biology1
    • Molecular microbiology1
    • Mutation1
    • Polymorphism1
    • Programming languages1
    • RFLP1
    • SNP1
    • Sequence analysis1
    • Sequence databases1
    • Single nucleotide polymorphism1
    • Software development1
    • Software engineering1
    • Somatic mutations1
    • VNTR1
    • Variable number of tandem repeat polymorphism1
    • snps1
    • Show N_FILTERS more
    • Tool
    • Galaxy5
    • QUAST2
    • BEDTools1
    • BUSCO1
    • BWA1
    • BamTools1
    • Bwa-mem21
    • Cutadapt1
    • FastQC1
    • FreeBayes1
    • GenomeScope 2.01
    • Merqury1
    • Minimap21
    • SALSA1
    • SAMtools1
    • STAR1
    • Vcflib1
    • gfastats1
    • purge_dups1
    • Show N_FILTERS more
    • Content provider
    • Galaxy Training7
    • Show N_FILTERS more
    • Keyword
    • Single Cell3
    • Assembly2
    • VGP2
    • biodiversity2
    • eukaryote2
    • pacbio2
    • Development in Galaxy1
    • Variant Analysis1
    • microgalaxy1
    • prokaryote1
    • work-in-progress1
    • Show N_FILTERS more
    • Difficulty level
    • Beginner5
    • Intermediate2
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International7
    • Show N_FILTERS more
    • Target audience
    • Students6
    • Galaxy Administrators1
    • Show N_FILTERS more
    • Author
    • Alex Ostrovsky
    • Helena Rasche113
    • SIB Swiss Institute of Bioinformatics102
    • Bérénice Batut90
    • Saskia Hiltemann55
    • Björn Grüning38
    • Anton Nekrutenko27
    • bebatut27
    • Anthony Bretaudeau26
    • bgruening25
    • Subina Mehta24
    • The Carpentries23
    • Yvan Le Bras22
    • Fotis E. Psomopoulos21
    • Michelle Brazas21
    • Simon Gladman21
    • Nicola Soranzo20
    • Wandrille Duchemin20
    • Nate Coraor19
    • Bazante Sanders18
    • Katarzyna Kamieniecka18
    • Krzysztof Poterlowicz18
    • Terri Attwood18
    • Wendi Bacon18
    • Marie Josse17
    • The Gulbenkian Training Programme in Bioinformatics17
    • Anne Fouilloux16
    • Mehmet Tekman15
    • Maria Doyle14
    • Martin Morgan14
    • Donny Vrins13
    • Geert van Geest13
    • James Johnson13
    • Julia Jakiela13
    • Katherine Do13
    • Patricia Palagi13
    • Wolfgang Maier13
    • shiltemann13
    • Cristóbal Gallardo12
    • Egon Willighagen12
    • Simon Andrews12
    • Simon Bray12
    • nekrut12
    • Anup Kumar11
    • Celia van Gelder11
    • Delphine Lariviere11
    • Khaled Jum'ah11
    • Mathieu Bourgey11
    • Melanie Föll11
    • Pratik Jagtap11
    • Dave Clements10
    • Lucille Delisle10
    • Mijke Jetten10
    • Paul Yorke10
    • Pavankumar Videm10
    • Daniel Blankenberg9
    • David Wishart9
    • Jared Simpson9
    • John Chilton9
    • Marius van den Beek9
    • allegra.via Via9
    • Allegra Via8
    • Anika Erxleben8
    • Avans Hogeschool8
    • Boris Steipe8
    • Elisabeth Gasteiger8
    • Helen Brown8
    • Malachi Griffith8
    • Maria Levchenko8
    • Matthias Fahrner8
    • Paul Zierep8
    • Robin Engler8
    • Stéphanie Robin8
    • Timothy J. Griffin8
    • Alexander Botzki7
    • Alexandre Cormier7
    • Anne Pajon7
    • Erwan Corre7
    • Florian Christoph Sigloch7
    • Joachim Wolff7
    • Kaivan Kamali7
    • Korbinian Bösl7
    • Laura Cooper7
    • Laura Leroi7
    • Martin Čech7
    • Michael Charleston7
    • Personalized Health Informatics Group7
    • Praveen Kumar7
    • Robert Andrews7
    • Sergio Martínez Cuesta7
    • pajanne7
    • stortebecker7
    • Andrew Mason6
    • Anna Syme6
    • Branka Franicevic6
    • Christopher Barnett6
    • Coline Royaux6
    • Dayane Araujo6
    • ELIXIR Goblet Train the Trainers6
    • Eija Korpelainen6
    • Show N_FILTERS more
    • Contributor
    • Helena Rasche7
    • Björn Grüning6
    • Saskia Hiltemann6
    • Bérénice Batut4
    • Anton Nekrutenko3
    • Alex Ostrovsky2
    • Anna Syme2
    • Anthony Bretaudeau2
    • Cristóbal Gallardo2
    • Delphine Lariviere2
    • Gildas Le Corguillé2
    • Linelle Abueg2
    • Marius van den Beek2
    • Mehmet Tekman2
    • Dave B.1
    • Matthias Bernt1
    • Mélanie Petera1
    • Nate Coraor1
    • Niall Beard1
    • Nicola Soranzo1
    • Pavankumar Videm1
    • Simon Bray1
    • Stéphanie Robin1
    • Teresa Müller1
    • Vijay1
    • Wendi Bacon1
    • William Durand1
    • Show N_FILTERS more
    • Resource type
    • e-learning5
    • slides2
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets7
    • Associated Workflows4
    • Quarto/RMarkdown Notebook2
    • Show N_FILTERS more
  • Show disabled materials
  • Show archived materials
    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month

Training materials

  • Subscribe via email

Email Subscription

Register training material

Authors: Alex Ostrovsky

7 materials found
  • e-learning

    Using the VGP workflows to assemble a vertebrate genome with HiFi and Hi-C data

    •• intermediate
    Sequence assembly Chromosome conformation capture Assembly VGP biodiversity eukaryote pacbio
  • e-learning

    Vertebrate genome assembly using HiFi, Bionano and Hi-C data - Step by Step

    •• intermediate
    Sequence assembly Genomics Biodiversity Assembly VGP biodiversity eukaryote pacbio
  • e-learning

    Calling variants in non-diploid systems

    • beginner
    Genetic variation Genomics Sequence assembly DNA polymorphism Microbiology Sequence analysis Variant Analysis microgalaxy prokaryote
  • e-learning

    Downstream Single-cell RNA analysis with RaceID

    • beginner
    Single Cell work-in-progress
  • e-learning

    Creating Galaxy tools from Conda Through Deployment

    • beginner
    Software engineering Development in Galaxy
  • slides

    Dealing with Cross-Contamination in Fixed Barcode Protocols

    • beginner
    Single Cell
  • slides

    Plates, Batches, and Barcodes

    • beginner
    Single Cell
Training eSupport System
contact@example.com
Contribute
About TeSS
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.0
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.