Please note: This instance is for testing/development, and any content submitted may be changed or deleted without warning.
Training eSupport System
  • Log In
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Trainers
    • Providers
    • Nodes

TeSS makes use of some necessary cookies to provide its core functionality.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Scientific topic
    • Assembly3
    • Sequence assembly3
    • Exomes2
    • Genome annotation2
    • Genomes2
    • Genomics2
    • Personal genomics2
    • Synthetic genomics2
    • Viral genomics2
    • Whole genomes2
    • 3C technologies1
    • 3C-based methods1
    • Antimicrobial stewardship1
    • Biodiversity1
    • Biological sequences1
    • Chromatin accessibility1
    • Chromatin accessibility assay1
    • Chromosome conformation analysis1
    • Chromosome conformation capture1
    • DNA polymorphism1
    • DNA variation1
    • Genetic variation1
    • Genomic variation1
    • Medical microbiology1
    • Microbial genetics1
    • Microbial physiology1
    • Microbial surveillance1
    • Microbiological surveillance1
    • Microbiology1
    • Microsatellites1
    • Molecular infection biology1
    • Molecular microbiology1
    • Mutation1
    • Polymorphism1
    • RFLP1
    • SNP1
    • Sequence analysis1
    • Sequence databases1
    • Single nucleotide polymorphism1
    • Somatic mutations1
    • VNTR1
    • Variable number of tandem repeat polymorphism1
    • snps1
    • Show N_FILTERS more
    • Tool
    • Galaxy5
    • QUAST2
    • BEDTools1
    • BUSCO1
    • BWA1
    • BamTools1
    • Bwa-mem21
    • Cutadapt1
    • FastQC1
    • FreeBayes1
    • GenomeScope 2.01
    • Merqury1
    • Minimap21
    • SALSA1
    • SAMtools1
    • STAR1
    • Vcflib1
    • gfastats1
    • purge_dups1
    • Show N_FILTERS more
    • Content provider
    • Galaxy Training6
    • Show N_FILTERS more
    • Keyword
    • Single Cell3
    • Assembly2
    • VGP2
    • biodiversity2
    • eukaryote2
    • pacbio2
    • Variant Analysis1
    • microgalaxy1
    • prokaryote1
    • work-in-progress1
    • Show N_FILTERS more
    • Difficulty level
    • Beginner4
    • Intermediate2
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International6
    • Show N_FILTERS more
    • Target audience
    • Students
    • Show N_FILTERS more
    • Author
    • Alex Ostrovsky
    • Bérénice Batut42
    • Helena Rasche23
    • Saskia Hiltemann23
    • Anton Nekrutenko22
    • Björn Grüning17
    • Anthony Bretaudeau16
    • Subina Mehta16
    • Nicola Soranzo14
    • Mehmet Tekman13
    • Yvan Le Bras13
    • Anup Kumar11
    • Cristóbal Gallardo11
    • Melanie Föll11
    • Pratik Jagtap11
    • Wendi Bacon11
    • Anne Fouilloux10
    • Delphine Lariviere10
    • Maria Doyle10
    • Simon Bray10
    • Wolfgang Maier10
    • Julia Jakiela9
    • Pavankumar Videm9
    • Anika Erxleben8
    • Dave Clements8
    • Katarzyna Kamieniecka8
    • Khaled Jum'ah8
    • Krzysztof Poterlowicz8
    • Marie Josse8
    • Timothy J. Griffin8
    • Florian Christoph Sigloch7
    • Joachim Wolff7
    • Matthias Fahrner7
    • Praveen Kumar7
    • Simon Gladman7
    • Stéphanie Robin7
    • Anne Pajon6
    • Christopher Barnett6
    • Daniel Blankenberg6
    • Emma Leith6
    • Erwan Corre6
    • Morgan Howells6
    • Nadia Goué6
    • Alexandre Cormier5
    • Andrew Mason5
    • Anna Syme5
    • Branka Franicevic5
    • Dechen Bhuming5
    • James Johnson5
    • Katherine Do5
    • Kellie Snow5
    • Korneel Hens5
    • Laura Cooper5
    • Laura Leroi5
    • Leonid Kostrykin5
    • Marius van den Beek5
    • Munazah Andrabi5
    • Nick Juty5
    • Philippe Rocca-Serra5
    • Raphael Mourad5
    • Ray Sajulga5
    • Robert Andrews5
    • Sara Morsy5
    • Saskia Lawson-Tovey5
    • Xenia Perez Sitja5
    • Alireza Khanteymoori4
    • Amirhossein Naghsh Nilchi4
    • Bazante Sanders4
    • Beatriz Serrano-Solano4
    • Clemens Blank4
    • Diana Chiang Jurado4
    • Mallory Freeberg4
    • Paul Zierep4
    • Vivek Bhardwaj4
    • Belinda Phipson3
    • Engy Nasr3
    • Fidel Ramirez3
    • Florian Heyl3
    • Fotis E. Psomopoulos3
    • Gildas Le Corguillé3
    • Jean-François Martin3
    • Lucille Delisle3
    • Marie Crane3
    • Marisa Loach3
    • Mo Heydarian3
    • Mélanie Petera3
    • Riccardo Massei3
    • Tharindu Senapathi3
    • Brandon Pickett2
    • Camila Goclowski2
    • Christoph Stritt2
    • Clea Siguret2
    • Coline Royaux2
    • Daniela Brites2
    • Daniela Schneider2
    • Ekaterina Polkh2
    • Eli Chadwick2
    • Fabio Cumbo2
    • Friederike Dündar2
    • Galo A. Goig2
    • Show N_FILTERS more
    • Contributor
    • Björn Grüning
    • Helena Rasche6
    • Saskia Hiltemann5
    • Bérénice Batut4
    • Anton Nekrutenko3
    • Anna Syme2
    • Cristóbal Gallardo2
    • Delphine Lariviere2
    • Linelle Abueg2
    • Mehmet Tekman2
    • Alex Ostrovsky1
    • Anthony Bretaudeau1
    • Gildas Le Corguillé1
    • Marius van den Beek1
    • Mélanie Petera1
    • Nate Coraor1
    • Niall Beard1
    • Nicola Soranzo1
    • Pavankumar Videm1
    • Saim Momin1
    • Simon Bray1
    • Stéphanie Robin1
    • Teresa Müller1
    • Vijay1
    • Wendi Bacon1
    • William Durand1
    • Show N_FILTERS more
    • Resource type
    • e-learning4
    • slides2
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets6
    • Associated Workflows4
    • Quarto/RMarkdown Notebook1
    • Show N_FILTERS more
  • Show disabled materials
  • Show archived materials
    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month

Training materials

  • Subscribe via email

Email Subscription

Register training material

Target audience: Students

and Authors: Alex Ostrovsky

and Contributors: Björn Grüning

6 materials found
  • e-learning

    Vertebrate genome assembly using HiFi, Bionano and Hi-C data - Step by Step

    •• intermediate
    Sequence assembly Genomics Biodiversity Assembly VGP biodiversity eukaryote pacbio
  • e-learning

    Using the VGP workflows to assemble a vertebrate genome with HiFi and Hi-C data

    •• intermediate
    Sequence assembly Chromosome conformation capture Assembly VGP biodiversity eukaryote pacbio
  • e-learning

    Calling variants in non-diploid systems

    • beginner
    Genetic variation Genomics Sequence assembly DNA polymorphism Microbiology Sequence analysis Variant Analysis microgalaxy prokaryote
  • e-learning

    Downstream Single-cell RNA analysis with RaceID

    • beginner
    Single Cell work-in-progress
  • slides

    Plates, Batches, and Barcodes

    • beginner
    Single Cell
  • slides

    Dealing with Cross-Contamination in Fixed Barcode Protocols

    • beginner
    Single Cell
Training eSupport System
contact@example.com
Contribute
About TeSS
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.0
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.