Please note: This instance is for testing/development, and any content submitted may be changed or deleted without warning.
Training eSupport System
  • Log In
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Trainers
    • Providers
    • Nodes

TeSS makes use of some necessary cookies to provide its core functionality.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Scientific topic
    • Algorithms1
    • Antimicrobial stewardship1
    • Assembly1
    • Biological sequences1
    • Computer programming1
    • DNA polymorphism1
    • DNA variation1
    • Data structures1
    • Exomes1
    • Genetic variation1
    • Genome annotation1
    • Genomes1
    • Genomic variation1
    • Genomics1
    • Medical microbiology1
    • Microbial genetics1
    • Microbial physiology1
    • Microbial surveillance1
    • Microbiological surveillance1
    • Microbiology1
    • Microsatellites1
    • Molecular infection biology1
    • Molecular microbiology1
    • Mutation1
    • Personal genomics1
    • Polymorphism1
    • Programming languages1
    • RFLP1
    • SNP1
    • Sequence analysis1
    • Sequence assembly1
    • Sequence databases1
    • Single nucleotide polymorphism1
    • Software development1
    • Software engineering1
    • Somatic mutations1
    • Synthetic genomics1
    • VNTR1
    • Variable number of tandem repeat polymorphism1
    • Viral genomics1
    • Whole genomes1
    • snps1
    • Show N_FILTERS more
    • Tool
    • Galaxy3
    • BWA1
    • BamTools1
    • FastQC1
    • FreeBayes1
    • SAMtools1
    • STAR1
    • Vcflib1
    • Show N_FILTERS more
    • Content provider
    • Galaxy Training5
    • Show N_FILTERS more
    • Keyword
    • Single Cell3
    • Development in Galaxy1
    • Variant Analysis1
    • microgalaxy1
    • prokaryote1
    • work-in-progress1
    • Show N_FILTERS more
    • Difficulty level
    • Beginner
    • Intermediate2
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International5
    • Show N_FILTERS more
    • Target audience
    • Students4
    • Galaxy Administrators1
    • Show N_FILTERS more
    • Author
    • Alex Ostrovsky
    • Helena Rasche85
    • Bérénice Batut82
    • SIB Swiss Institute of Bioinformatics79
    • Saskia Hiltemann49
    • Björn Grüning32
    • Anton Nekrutenko22
    • Yvan Le Bras22
    • Nicola Soranzo20
    • Nate Coraor19
    • Simon Gladman19
    • Subina Mehta18
    • Wendi Bacon18
    • Katarzyna Kamieniecka17
    • Krzysztof Poterlowicz17
    • Marie Josse17
    • Anne Fouilloux16
    • Fotis E. Psomopoulos16
    • Anthony Bretaudeau15
    • Bazante Sanders14
    • Mehmet Tekman14
    • Julia Jakiela13
    • Katherine Do13
    • Maria Doyle13
    • The Carpentries13
    • Anup Kumar11
    • Dave Clements10
    • Donny Vrins10
    • James Johnson10
    • Khaled Jum'ah10
    • Mijke Jetten10
    • Pavankumar Videm10
    • Geert van Geest9
    • Lucille Delisle9
    • Wandrille Duchemin9
    • Anika Erxleben8
    • Celia van Gelder8
    • Cristóbal Gallardo8
    • Elisabeth Gasteiger8
    • Helen Brown8
    • Paul Zierep8
    • Daniel Blankenberg7
    • Delphine Lariviere7
    • Joachim Wolff7
    • John Chilton7
    • Kaivan Kamali7
    • Korbinian Bösl7
    • Laura Cooper7
    • Marius van den Beek7
    • Martin Čech7
    • Robert Andrews7
    • Sergio Martínez Cuesta7
    • Wolfgang Maier7
    • Allegra Via6
    • Andrew Mason6
    • Anne Pajon6
    • Branka Franicevic6
    • Coline Royaux6
    • ELIXIR Goblet Train the Trainers6
    • Melanie Föll6
    • Michael Charleston6
    • Morgan Howells6
    • Patricia Palagi6
    • Philippe Le Mercier6
    • Philippe Rocca-Serra6
    • Sara Morsy6
    • Valentin Loux6
    • Xenia Perez Sitja6
    • Alexandre Cormier5
    • Anna Syme5
    • Beatriz Serrano-Solano5
    • Clemens Blank5
    • Dechen Bhuming5
    • Egon Willighagen5
    • Erwan Corre5
    • Hans-Rudolf Hotz5
    • Hélène Chiapello5
    • Kellie Snow5
    • Korneel Hens5
    • Laura Leroi5
    • Marie-Claude Blatter5
    • Mira Kuntz5
    • Munazah Andrabi5
    • Nick Juty5
    • Personalized Health Informatics Group5
    • Pratik Jagtap5
    • Saskia Lawson-Tovey5
    • Stéphanie Robin5
    • Alireza Khanteymoori4
    • Ana-Claudia Sima4
    • Diana Chiang Jurado4
    • Eija Korpelainen4
    • Emma Griffiths4
    • Florian Heyl4
    • Frédéric de Lamotte4
    • Gildas Le Corguillé4
    • Grégoire Rossier4
    • Leonid Kostrykin4
    • Mallory Freeberg4
    • Marc Robinson-Rechavi4
    • Show N_FILTERS more
    • Contributor
    • Helena Rasche5
    • Björn Grüning4
    • Saskia Hiltemann4
    • Alex Ostrovsky2
    • Anthony Bretaudeau2
    • Bérénice Batut2
    • Gildas Le Corguillé2
    • Mehmet Tekman2
    • Anton Nekrutenko1
    • Dave B.1
    • Marius van den Beek1
    • Matthias Bernt1
    • Mélanie Petera1
    • Nate Coraor1
    • Niall Beard1
    • Nicola Soranzo1
    • Pavankumar Videm1
    • Simon Bray1
    • Stéphanie Robin1
    • Vijay1
    • Wendi Bacon1
    • William Durand1
    • Show N_FILTERS more
    • Resource type
    • e-learning3
    • slides2
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets5
    • Associated Workflows3
    • Quarto/RMarkdown Notebook2
    • Show N_FILTERS more
  • Show disabled materials
  • Hide archived materials
    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month

Training materials

  • Subscribe via email

Email Subscription

Register training material

Difficulty level: Beginner

and Authors: Alex Ostrovsky

and Include archived: true

5 materials found
  • e-learning

    Calling variants in non-diploid systems

    • beginner
    Genetic variation Genomics Sequence assembly DNA polymorphism Microbiology Sequence analysis Variant Analysis microgalaxy prokaryote
  • e-learning

    Downstream Single-cell RNA analysis with RaceID

    • beginner
    Single Cell work-in-progress
  • e-learning

    Creating Galaxy tools from Conda Through Deployment

    • beginner
    Software engineering Development in Galaxy
  • slides

    Dealing with Cross-Contamination in Fixed Barcode Protocols

    • beginner
    Single Cell
  • slides

    Plates, Batches, and Barcodes

    • beginner
    Single Cell
Training eSupport System
contact@example.com
Contribute
About TeSS
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.0
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.