Training materials
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e-learning
CLI basics
• beginnerSoftware engineering Foundations of Data Science bash jupyter-notebook -
e-learning
Data Manipulation Olympics
• beginnerSoftware engineering Foundations of Data Science cyoa -
e-learning
Mass spectrometry imaging: Loading and exploring MSI data
• beginnerProteomics imaging mouse -
e-learning
Microbial Variant Calling
• beginnerGenetic variation Genomics Sequence assembly DNA polymorphism Microbiology Sequence analysis Variant Analysis gmod jbrowse1 microgalaxy prokaryote -
e-learning
Calling variants in non-diploid systems
• beginnerGenetic variation Genomics Sequence assembly DNA polymorphism Microbiology Sequence analysis Variant Analysis microgalaxy prokaryote -
e-learning
Data management in Medicinal Chemistry
• beginnerComputational chemistry FAIR Data, Workflows, and Research computational-chemistry data-management fair medicinal-chemistry -
e-learning
From NCBI's Sequence Read Archive (SRA) to Galaxy: SARS-CoV-2 variant analysis
• beginnerGenetic variation Variant Analysis covid19 one-health virology -
slides
Introduction to SRA Aligned Read Format and Cloud Metadata for SARS-CoV-2
• beginnerUsing Galaxy and Managing your Data covid19 ncbi -
e-learning
Functionally Assembled Terrestrial Ecosystem Simulator (FATES)
• beginnerClimate interactive-tools -
slides
The Pangeo ecosystem
• beginnerClimate climate