Training materials
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e-learning
Advanced R in Galaxy
•• intermediateSoftware engineering Foundations of Data Science R -
e-learning
Virtual Environments For Software Development
•• intermediateSoftware engineering Foundations of Data Science jupyter-notebook -
e-learning
Data Manipulation Olympics - JQ
• beginnerSoftware engineering Foundations of Data Science cyoa json -
e-learning
dplyr & tidyverse for data processing
••• advancedSoftware engineering Foundations of Data Science R jupyter-notebook rmarkdown-notebook -
e-learning
Plotting in Python
•• intermediateSoftware engineering Foundations of Data Science jupyter-notebook -
e-learning
Genome annotation with Maker (short)
•• intermediateGenomics Genome Annotation eukaryote gmod jbrowse1 maker -
e-learning
Functional annotation of protein sequences
• beginnerGenomics Function analysis Protein sites, features and motifs Genome Annotation biodiversity eukaryote -
e-learning
Identification of AMR genes in an assembled bacterial genome
• beginnerGenomics Whole genome sequencing Public health and epidemiology Microbiology Sequence analysis Infectious disease Antimicrobial resistance Genome Annotation amr gmod … -
e-learning
Genome Annotation
• beginnerGenomics Genome Annotation prokaryote work-in-progress -
e-learning
Comparative gene analysis in unannotated genomes
• beginnerGenomics Gene and protein families Sequence analysis Phylogeny Comparative genomics Genome Annotation annotation biodiversity cookbook eukaryote …