Filter

• Sort

• • Most recent Last modified Title descending Title ascending

• Filter Clear filters

• • Scientific topic
  • Exomes44
  • Genome annotation44
  • Genomes44
  • Genomics44
  • Personal genomics44
  • Synthetic genomics44
  • Viral genomics44
  • Whole genomes44
  • Biological sequences32
  • Sequence analysis32
  • Sequence databases32
  • Bottom-up proteomics31
  • Discovery proteomics31
  • MS-based targeted proteomics31
  • MS-based untargeted proteomics31
  • Metaproteomics31
  • Peptide identification31
  • Protein and peptide identification31
  • Proteomics31
  • Quantitative proteomics31
  • Targeted proteomics31
  • Top-down proteomics31
  • Bayesian methods26
  • Biostatistics26
  • Community analysis26
  • Comparative transcriptomics26
  • Descriptive statistics26
  • Environmental microbiology26
  • Gaussian processes26
  • Inferential statistics26
  • Markov processes26
  • Microbial ecology26
  • Microbiome26
  • Molecular community analysis26
  • Multivariate statistics26
  • Probabilistic graphical model26
  • Probability26
  • Statistics26
  • Statistics and probability26
  • Transcriptome26
  • Transcriptomics26
  • Metagenomics25
  • Shotgun metagenomics25
  • Assembly23
  • Sequence assembly23
  • Antimicrobial stewardship22
  • Medical microbiology22
  • Microbial genetics22
  • Microbial physiology22
  • Microbial surveillance22
  • Microbiological surveillance22
  • Microbiology22
  • Molecular infection biology22
  • Molecular microbiology22
  • Computational ecology14
  • Ecoinformatics14
  • Ecological informatics14
  • Ecology14
  • Ecosystem science14
  • Taxonomy14
  • Algorithms13
  • Computer programming13
  • Data structures13
  • Programming languages13
  • Software development13
  • Software engineering13
  • DNA variation12
  • Genetic variation12
  • Genomic variation12
  • Mutation12
  • Polymorphism12
  • Somatic mutations12
  • Diffraction experiment11
  • Epigenomics11
  • Imaging11
  • Microscopy11
  • Microscopy imaging11
  • Optical super resolution microscopy11
  • Photonic force microscopy11
  • Photonic microscopy11
  • Evolution10
  • Evolutionary biology10
  • Exometabolomics10
  • LC-MS-based metabolomics10
  • MS-based metabolomics10
  • MS-based targeted metabolomics10
  • MS-based untargeted metabolomics10
  • Mass spectrometry-based metabolomics10
  • Metabolites10
  • Metabolome10
  • Metabolomics10
  • Metabonomics10
  • NMR-based metabolomics10
  • Biodiversity9
  • Computational chemistry7
  • De novo genome sequencing6
  • Epidemiology6
  • Genome sequencing6
  • Public health6
  • Public health and epidemiology6
  • Show N_FILTERS more
• • Tool
  • Galaxy271
  • FastQC33
  • MultiQC22
  • SAMtools22
  • BEDTools16
  • fastp15
  • scikit-learn15
  • JBrowse14
  • BWA13
  • Cutadapt13
  • DeepTools12
  • SCANPY12
  • BLAST11
  • STAR11
  • taxonomy_krona_chart10
  • FreeBayes9
  • GEMINI9
  • QUAST9
  • BUSCO8
  • Falco8
  • NanoPlot8
  • Trimmomatic8
  • kraken28
  • HISAT27
  • msConvert7
  • BamTools6
  • Biopython6
  • Workflow4Metabolomics6
  • gffread6
  • ggplot26
  • scikit-image6
  • BCFtools5
  • Bandage5
  • Bowtie 25
  • FASTX-Toolkit5
  • Galactic Circos5
  • Galaxy Image Analysis5
  • MaxQuant5
  • MetaPhlAn5
  • RSeQC5
  • StringTie5
  • gffcompare5
  • xcms5
  • Flye4
  • KrakenTools4
  • MACS4
  • MAFFT4
  • MSstats4
  • Minimap24
  • MuSiC suite: PoPMuSiC, HoTMuSiC, and SNPMuSiC4
  • Newick Utilities4
  • Open Babel4
  • Trim Galore4
  • anndata4
  • annotatemyids4
  • compute_sequence_length4
  • mothur4
  • Apollo3
  • Bracken3
  • Bwa-mem23
  • Cardinal3
  • Clustal 1.8 (Clustal W, Clustal X)3
  • Diamond3
  • DropletUtils3
  • FastTree3
  • GOseq3
  • GraPhlAn3
  • Merqury3
  • OMArk3
  • RStudio3
  • Salmon3
  • SeqCode3
  • SortMeRNA3
  • Stacks3
  • UniProt3
  • Unicycler3
  • Unipept3
  • bed to protein map3
  • bx-python3
  • customProDB3
  • export2graphlan3
  • humann3
  • pyGenomeTracks3
  • seqtk3
  • snippy3
  • Bakta2
  • Bio3D2
  • COMBAT-TB Workbench2
  • ChIPpeakAnno2
  • CheckM2
  • Circos2
  • Combine Metaphlan and HUMAnN2
  • DESeq22
  • European Nucleotide Archive (ENA)2
  • FASTQE2
  • FeatureCounts2
  • GECKO2
  • GOEnrichment2
  • GenomeScope 2.02
  • Gromacs2
  • Show N_FILTERS more
• • Content provider
  • Galaxy Training
  • Show N_FILTERS more
• • Keyword
  • microgalaxy37
  • Single Cell34
  • Proteomics31
  • biodiversity28
  • Genome Annotation27
  • Transcriptomics26
  • Statistics and machine learning25
  • Galaxy Server administration23
  • Microbiome22
  • Assembly16
  • jbrowse116
  • Using Galaxy and Managing your Data15
  • Ecology14
  • fair14
  • gmod14
  • FAIR Data, Workflows, and Research13
  • prokaryote13
  • Variant Analysis12
  • Epigenetics11
  • Imaging11
  • Sequence analysis11
  • paper-replication11
  • work-in-progress11
  • Evolution10
  • Foundations of Data Science10
  • Introduction to Galaxy Analyses10
  • MIGHTS10
  • Metabolomics10
  • data stewardship10
  • eukaryote10
  • ansible9
  • cyoa9
  • git-gat9
  • interactive-tools9
  • jupyter-notebook9
  • label-free9
  • plants9
  • Climate8
  • Computational chemistry7
  • DDA7
  • dmp7
  • 10x6
  • EBV dataset6
  • assembly6
  • collections6
  • nanopore6
  • transcriptomics6
  • EBV workflow5
  • Visualisation5
  • data management5
  • illumina5
  • label-TMT115
  • metagenomics5
  • one-health5
  • 16S4
  • DIA4
  • Genetic composition EBV class4
  • HeLa4
  • bacteria4
  • bioimaging4
  • covid194
  • metabarcoding4
  • mouse4
  • ChIP-seq3
  • FAIR3
  • QC3
  • RAD-seq3
  • amr3
  • apollo23
  • epigenetics3
  • eukaryota3
  • metatranscriptomics3
  • open3
  • pangeo3
  • proteogenomics3
  • rmarkdown-notebook3
  • Braker32
  • Community composition EBV class2
  • Data Paper2
  • Development in Galaxy2
  • EML2
  • Metadata2
  • Species population EBV class2
  • Species populations EBV class2
  • Synthetic Biology2
  • VGP2
  • bulk2
  • climate2
  • data import2
  • deep-learning2
  • ecology2
  • essential genes2
  • evolution2
  • human2
  • jobs2
  • jupyter-lab2
  • machine-learning2
  • maker2
  • monitoring2
  • networking2
  • Show N_FILTERS more
• • Difficulty level
  • Beginner297
  • Intermediate53
  • Advanced9
  • Show N_FILTERS more
• • Licence
  • Creative Commons Attribution 4.0 International359
  • Show N_FILTERS more
• • Target audience
  • Students333
  • Galaxy Administrators25
  • Instructors1
  • Show N_FILTERS more
• • Author
  • Bérénice Batut41
  • Helena Rasche40
  • Saskia Hiltemann28
  • Subina Mehta24
  • Anthony Bretaudeau20
  • Björn Grüning19
  • Anton Nekrutenko17
  • Katarzyna Kamieniecka17
  • Krzysztof Poterlowicz17
  • Mehmet Tekman14
  • James Johnson13
  • Katherine Do13
  • Maria Doyle13
  • Nicola Soranzo13
  • Simon Gladman12
  • Anne Fouilloux11
  • Anup Kumar11
  • Khaled Jum'ah11
  • Pratik Jagtap11
  • Yvan Le Bras11
  • Pavankumar Videm10
  • Wendi Bacon10
  • Cristóbal Gallardo9
  • Delphine Lariviere9
  • Julia Jakiela9
  • Melanie Föll9
  • Simon Bray9
  • Timothy J. Griffin8
  • Wolfgang Maier8
  • Alex Ostrovsky7
  • Anika Erxleben7
  • Dave Clements7
  • Kaivan Kamali7
  • Laura Cooper7
  • Michael Charleston7
  • Praveen Kumar7
  • Robert Andrews7
  • Andrew Mason6
  • Anna Syme6
  • Anne Pajon6
  • Branka Franicevic6
  • Emma Leith6
  • Erwan Corre6
  • Joachim Wolff6
  • Lucille Delisle6
  • Matthias Fahrner6
  • Philippe Rocca-Serra6
  • Sara Morsy6
  • Stéphanie Robin6
  • Xenia Perez Sitja6
  • Alexandre Cormier5
  • Christopher Barnett5
  • Daniel Blankenberg5
  • Dechen Bhuming5
  • Florian Christoph Sigloch5
  • Kellie Snow5
  • Korneel Hens5
  • Laura Leroi5
  • Leonid Kostrykin5
  • Marius van den Beek5
  • Munazah Andrabi5
  • Nick Juty5
  • Paul Zierep5
  • Ray Sajulga5
  • Saskia Lawson-Tovey5
  • Valentin Loux5
  • Alireza Khanteymoori4
  • Bazante Sanders4
  • Clemens Blank4
  • Coline Royaux4
  • Diana Chiang Jurado4
  • Florian Heyl4
  • Fotis E. Psomopoulos4
  • Helge Hecht4
  • Hélène Chiapello4
  • Mallory Freeberg4
  • Mateo Boudet4
  • Morgan Howells4
  • Mélanie Petera4
  • Nadia Goué4
  • Nate Coraor4
  • Vivek Bhardwaj4
  • Beatriz Serrano-Solano3
  • Belinda Phipson3
  • Engy Nasr3
  • Fidel Ramirez3
  • Gildas Le Corguillé3
  • Hans-Rudolf Hotz3
  • Jean-François Martin3
  • Lisanna Paladin3
  • Marie Crane3
  • Marisa Loach3
  • Matthias Bernt3
  • Miguel Roncoroni3
  • Mira Kuntz3
  • Mo Heydarian3
  • Polina Polunina3
  • Romane LIBOUBAN3
  • Tharindu Senapathi3
  • The Carpentries3
  • Show N_FILTERS more
• • Contributor
  • Saskia Hiltemann314
  • Helena Rasche281
  • Björn Grüning238
  • Bérénice Batut145
  • Nicola Soranzo85
  • Anthony Bretaudeau63
  • Cristóbal Gallardo59
  • Martin Čech57
  • Niall Beard52
  • Armin Dadras36
  • Teresa Müller36
  • Gildas Le Corguillé35
  • Mehmet Tekman35
  • William Durand34
  • Wendi Bacon33
  • Nate Coraor32
  • Pavankumar Videm31
  • Melanie Föll27
  • Lucille Delisle25
  • Wolfgang Maier24
  • Marius van den Beek23
  • Subina Mehta23
  • Maria Doyle21
  • Simon Bray20
  • Simon Gladman19
  • Yvan Le Bras19
  • Anup Kumar17
  • Khaled Jum'ah16
  • Beatriz Serrano-Solano15
  • Deepti Varshney15
  • Anne Fouilloux14
  • Julia Jakiela14
  • Pratik Jagtap13
  • Timothy J. Griffin13
  • Anton Nekrutenko11
  • Matthias Bernt11
  • Mélanie Petera11
  • Katarzyna Kamieniecka10
  • Paul Zierep10
  • Pablo Moreno8
  • Stéphanie Robin8
  • David López7
  • Delphine Lariviere7
  • Kaivan Kamali7
  • Katherine Do7
  • Leonid Kostrykin7
  • Mallory Freeberg7
  • Marisa Loach7
  • Melissa Burke7
  • Verena Moosmann7
  • Alexandre Cormier6
  • Anna Syme6
  • Dave Clements6
  • Hans-Rudolf Hotz6
  • Mira Kuntz6
  • Morgan Howells6
  • Alireza Khanteymoori5
  • Bert Droesbeke5
  • Christopher Barnett5
  • Clemens Blank5
  • Ekaterina Polkh5
  • Florian Christoph Sigloch5
  • Florian Heyl5
  • Gianmauro Cuccuru5
  • Linelle Abueg5
  • Peter van Heusden5
  • Clea Siguret4
  • Diana Chiang Jurado4
  • Alex Ostrovsky3
  • Amirhossein Naghsh Nilchi3
  • Bazante Sanders3
  • Coline Royaux3
  • Donny Vrins3
  • Engy Nasr3
  • Fabio Cumbo3
  • Joachim Wolff3
  • Krzysztof Poterlowicz3
  • Mateo Boudet3
  • Miaomiao Zhou3
  • Timon Schlegel3
  • Xavier Garnier3
  • Ahmed Hamid Awan2
  • Anika Erxleben2
  • Camila Goclowski2
  • Carlos Chee Mendonça2
  • Catherine Bromhead2
  • Christine Oger2
  • Christoph Stritt2
  • CicoZhang2
  • Daniela Schneider2
  • Enis Afgan2
  • Esteban Perez-Wohlfeil2
  • Fidel Ramirez2
  • Graeme Tyson2
  • Helge Hecht2
  • Jasper Ouwerkerk2
  • Jennifer Hillman-Jackson2
  • John Davis2
  • Jonathan Kreplak2
  • Jonathan Manning2
  • Show N_FILTERS more
• • Resource type
  • e-learning314
  • slides45
  • Show N_FILTERS more
• • Related resource
  • Associated Training Datasets
  • Associated Workflows280
  • Quarto/RMarkdown Notebook185
  • Jupyter Notebook (with Solutions)52
  • Jupyter Notebook (without Solutions)52
  • Input datasets32
  • ansible19
  • git-gat18
  • Associated slides9
  • Proteomics dataset5
  • Sequence analysis dataset5
  • Transcriptomics dataset5
  • jobs5
  • Assembly dataset4
  • Variant Analysis dataset4
  • Assembly slides3
  • Development in Galaxy slides3
  • deploying3
  • monitoring3
  • ro-crate3
  • ChIP-Seq data analysis dataset2
  • Epigenetics dataset2
  • Genome Annotation dataset2
  • Metagenomics dataset2
  • Sequence analysis slides2
  • collections2
  • cyoa2
  • kubernetes2
  • networking2
  • storage2
  • training2
  • wireguard2
  • workflows2
  • Community1
  • Contributing to the Galaxy Training Material slides1
  • DDA1
  • ENA1
  • FAIR1
  • Galaxy Server administration slides1
  • Genome Annotation slides1
  • Introduction to Galaxy Analyses dataset1
  • Introduction to Galaxy dataset1
  • SIG1
  • Statistics dataset1
  • Transcriptomics slides1
  • User Interface and Features dataset1
  • apollo21
  • authentication1
  • automation1
  • beacon1
  • broken1
  • cloud1
  • data1
  • fair1
  • features1
  • ga4gh1
  • gmod1
  • gtn1
  • interactive-tools1
  • systemd1
  • tags1
  • terraform1
  • tools1
  • work-in-progress1
  • Show N_FILTERS more
• Show disabled materials
• Show archived materials
• • Date added
  • In the last 24 hours
  • In the last 1 week
  • In the last 1 month