Training materials
Licence: Creative Commons Attribution Share Alike 4.0 International
and Operations: Somatic variant calling
and Content provider: Swiss Institute of Bioinformatics
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Operation
- Somatic variant calling
- Data handling6
- File handling6
- File processing6
- Processing6
- Report handling6
- Utility operation6
- Data extraction3
- Data retrieval3
- Data retrieval (metadata)3
- Database retrieval3
- Metadata retrieval3
- Query3
- Query and retrieval3
- Retrieval3
- Data visualisation2
- Molecular visualisation2
- Ontology browsing2
- Ontology visualisation2
- Plotting2
- Rendering2
- Visualisation2
- Alignment1
- Alignment construction1
- Alignment generation1
- Allele calling1
- Database search1
- Editing1
- Exome variant detection1
- Genome variant detection1
- Germ line variant calling1
- Mutation detection1
- Normalisation1
- Quality control1
- Read pre-processing1
- Search1
- Sequence read pre-processing1
- Standardisation1
- Standardisation and normalisation1
- Validation1
- Variant calling1
- Variant mapping1
- de novo mutation detection1
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Content provider
- Swiss Institute of Bioinformatics
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Difficulty level
- Beginner1
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- Computer Software1
- workflow1
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