Training materials
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e-learning
Metatranscriptomics analysis using microbiome RNA-seq data (short)
• beginnerMetagenomics Microbial ecology Metatranscriptomics Taxonomy Function analysis Sequence analysis Microbiome metatranscriptomics microgalaxy -
e-learning
Analyses of metagenomics data - The global picture
• beginnerMetagenomics Microbial ecology Taxonomy Sequence analysis Metabarcoding Microbiome microgalaxy -
e-learning
Creation of resources listing all the tools and their metadata relevant to your community
• beginnerSoftware engineering CoDex Community Galaxy Community Building SIG -
e-learning
16S Microbial Analysis with mothur (short)
• beginnerMetagenomics Microbial ecology Taxonomy Sequence analysis Metabarcoding 16S Microbiome metabarcoding microgalaxy -
e-learning
Antibiotic resistance detection
• beginnerMetagenomics Microbial ecology Metagenomic sequencing Public health and epidemiology Microbiology Infectious disease Sequence analysis Antimicrobial resistance Microbiome amr … -
e-learning
Assembly of metagenomic sequencing data
• beginnerSequence assembly Metagenomics Assembly assembly metagenomics microgalaxy -
e-learning
CLI basics
• beginnerSoftware engineering Foundations of Data Science bash jupyter-notebook -
e-learning
Creating, Editing and Importing Galaxy Workflows
•• intermediateUsing Galaxy and Managing your Data workflows -
e-learning
Extracting Workflows from Histories
• beginnerUsing Galaxy and Managing your Data workflows -
e-learning
RO-Crate in Python
• beginnerFAIR Data, Workflows, and Research jupyter-notebook ro-crate