Training materials
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e-learning
Genome Assembly of MRSA from Oxford Nanopore MinION data (and optionally Illumina data)
• beginnerSequence assembly Whole genome sequencing Public health and epidemiology Genomics Microbiology Antimicrobial resistance Assembly amr assembly gmod jbrowse1 microgalaxy nanopore -
e-learning
Chloroplast genome assembly
• beginnerSequence assembly Assembly jbrowse1 nanopore plants -
e-learning
Genome assembly using PacBio data
•• intermediateSequence assembly Assembly assembly pacbio -
e-learning
Genome Assembly of a bacterial genome (MRSA) sequenced using Illumina MiSeq Data
• beginnerSequence assembly Whole genome sequencing Public health and epidemiology Genomics Microbiology Assembly assembly illumina microgalaxy -
e-learning
Managing Galaxy on Kubernetes
•• intermediateGalaxy Server administration kubernetes -
e-learning
Enable upload via FTP
• beginnerGalaxy Server administration data git-gat -
e-learning
Deploying Tailscale/Headscale for private mesh networking
• beginnerGalaxy Server administration networking wireguard -
e-learning
Deploying a compute cluster in OpenStack via Terraform
• beginnerGalaxy Server administration cloud deploying terraform -
e-learning
Galaxy Monitoring with Reports
• beginnerGalaxy Server administration ansible broken git-gat monitoring -
e-learning
Setting up Celery Workers for Galaxy
• beginnerGalaxy Server administration ansible git-gat