Training materials
Content provider: Galaxy Training
and Licence: Creative Commons Attribution 4.0 International
611 materials found
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Scientific topic
- Algorithms78
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- Exomes47
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- Bottom-up proteomics37
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Tool
- Galaxy334
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- kraken28
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- HISAT27
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- MuSiC suite: PoPMuSiC, HoTMuSiC, and SNPMuSiC5
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- compute_sequence_length5
- gffcompare5
- xcms5
- Bwa-mem24
- Diamond4
- GOseq4
- KrakenTools4
- MACS4
- MSstats4
- Merqury4
- Newick Utilities4
- SRA Software Toolkit4
- The Protein Data Bank (PDB)4
- UniProt4
- anndata4
- bx-python4
- mothur4
- pyGenomeTracks4
- snpEff4
- Apollo3
- Bracken3
- Cardinal3
- CellProfiler3
- Clustal 1.8 (Clustal W, Clustal X)3
- DESeq23
- DropletUtils3
- FastTree3
- GenomeScope 2.03
- GraPhlAn3
- InterProScan (EBI)3
- OMArk3
- QualiMap3
- RDKit3
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- bed to protein map3
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Content provider
- Galaxy Training
- DTLS - Dutch Techcentre For Life Sciences32
- ELIXIR Portugal16
- Centre for Digital Life Norway6
- VIB Bioinformatics Core5
- Australian BioCommons4
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- Bioconductor-Test1
- Department of Bioinformatics - BiGCaT, Maastricht University1
- InterMine1
- University of Cambridge Bioinformatics Training1
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Keyword
- Galaxy Server administration57
- jupyter-notebook55
- Foundations of Data Science50
- biodiversity41
- Single Cell40
- Statistics and machine learning39
- microgalaxy39
- Proteomics37
- Genome Annotation28
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- Ecology27
- Using Galaxy and Managing your Data27
- Contributing to the Galaxy Training Material26
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- Development in Galaxy25
- Assembly21
- FAIR Data, Workflows, and Research20
- ansible19
- Variant Analysis18
- git-gat18
- interactive-tools18
- Teaching and Hosting Galaxy training17
- elixir17
- work-in-progress17
- Climate16
- Imaging16
- jbrowse116
- earth-system15
- fair15
- Introduction to Galaxy Analyses14
- gmod14
- Epigenetics13
- prokaryote13
- Sequence analysis12
- paper-replication12
- MIGHTS11
- Metabolomics11
- ai-ml11
- cyoa11
- Evolution10
- covid1910
- data stewardship10
- eukaryote10
- label-free10
- ocean10
- plants10
- DDA9
- one-health9
- Computational chemistry8
- assembly8
- data management8
- workflows8
- 10x7
- EBV dataset7
- EBV workflow7
- Galaxy Community Building7
- Visualisation7
- bioimaging7
- collections7
- dmp7
- metagenomics7
- R6
- deploying6
- nanopore6
- rmarkdown-notebook6
- ro-crate6
- train-the-trainers6
- transcriptomics6
- 16S5
- Large Language Model5
- SQL5
- illumina5
- jobs5
- label-TMT115
- metabarcoding5
- mouse5
- virology5
- DIA4
- FAIR4
- Genetic composition EBV class4
- HeLa4
- QC4
- bacteria4
- diversity4
- pangeo4
- storage4
- taxonomic profiling4
- ChIP-seq3
- Community3
- Image analysis using Deep Learning3
- RAD-seq3
- SIG3
- Synthetic Biology3
- amr3
- apollo23
- bash3
- bioimageio3
- bulk3
- data import3
- ecology3
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Difficulty level
- Beginner500
- Intermediate96
- Advanced15
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Target audience
- Students479
- Galaxy Administrators82
- Instructors50
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Author
- Helena Rasche113
- Bérénice Batut92
- Saskia Hiltemann54
- Björn Grüning41
- Anton Nekrutenko27
- Anthony Bretaudeau26
- Subina Mehta24
- The Carpentries23
- Yvan Le Bras23
- Fotis E. Psomopoulos21
- Nicola Soranzo20
- Simon Gladman20
- Marie Josse19
- Bazante Sanders18
- Katarzyna Kamieniecka18
- Krzysztof Poterlowicz18
- Nate Coraor18
- Wendi Bacon18
- Anne Fouilloux16
- Mehmet Tekman15
- Donny Vrins13
- James Johnson13
- Julia Jakiela13
- Katherine Do13
- Maria Doyle13
- Wolfgang Maier13
- Cristóbal Gallardo12
- Simon Bray12
- Anup Kumar11
- Delphine Lariviere11
- Khaled Jum'ah11
- Melanie Föll11
- Pratik Jagtap11
- Dave Clements10
- Paul Zierep10
- Pavankumar Videm10
- Daniel Blankenberg9
- John Chilton9
- Marius van den Beek9
- Anika Erxleben8
- Avans Hogeschool8
- Lucille Delisle8
- Stéphanie Robin8
- Timothy J. Griffin8
- Alex Ostrovsky7
- Alexandre Cormier7
- Anne Pajon7
- Erwan Corre7
- Florian Christoph Sigloch7
- Joachim Wolff7
- Kaivan Kamali7
- Laura Cooper7
- Laura Leroi7
- Martin Čech7
- Matthias Fahrner7
- Michael Charleston7
- Praveen Kumar7
- Robert Andrews7
- Allegra Via6
- Andrew Mason6
- Anna Syme6
- Branka Franicevic6
- Christopher Barnett6
- Coline Royaux6
- ELIXIR Goblet Train the Trainers6
- Emma Leith6
- Morgan Howells6
- Nadia Goué6
- Patricia Palagi6
- Philippe Rocca-Serra6
- Raphael Mourad6
- Sara Morsy6
- Valentin Loux6
- Xenia Perez Sitja6
- Beatriz Serrano-Solano5
- Clemens Blank5
- Dechen Bhuming5
- Diana Chiang Jurado5
- Gildas Le Corguillé5
- John Davis5
- Kellie Snow5
- Korneel Hens5
- Leonid Kostrykin5
- Mira Kuntz5
- Munazah Andrabi5
- Nick Juty5
- Ray Sajulga5
- Saskia Lawson-Tovey5
- Solenne Correard5
- Alireza Khanteymoori4
- Amirhossein Naghsh Nilchi4
- Enis Afgan4
- Florian Heyl4
- Helge Hecht4
- Hélène Chiapello4
- Mallory Freeberg4
- Mateo Boudet4
- Mélanie Petera4
- Riccardo Massei4
- Simone Leo4
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Contributor
- Saskia Hiltemann523
- Helena Rasche466
- Björn Grüning386
- Bérénice Batut228
- Nicola Soranzo147
- Martin Čech113
- Anthony Bretaudeau103
- Cristóbal Gallardo95
- Niall Beard80
- Wendi Bacon72
- Nate Coraor61
- Armin Dadras60
- Gildas Le Corguillé57
- Marius van den Beek55
- William Durand55
- Mehmet Tekman44
- Teresa Müller44
- Simon Gladman43
- Lucille Delisle41
- Pavankumar Videm37
- Yvan Le Bras37
- Wolfgang Maier36
- Melanie Föll34
- Beatriz Serrano-Solano32
- Simon Bray28
- Anup Kumar26
- Subina Mehta25
- Donny Vrins24
- Maria Doyle23
- Peter van Heusden23
- Anne Fouilloux20
- Julia Jakiela20
- Bazante Sanders19
- Anton Nekrutenko17
- Khaled Jum'ah17
- Deepti Varshney16
- Marie Josse14
- Mélanie Petera14
- Pratik Jagtap13
- Timothy J. Griffin13
- Matthias Bernt12
- Mira Kuntz12
- Pablo Moreno12
- Paul Zierep12
- David López11
- Delphine Lariviere11
- Katarzyna Kamieniecka11
- Marisa Loach11
- Stéphanie Robin11
- Gianmauro Cuccuru10
- Leonid Kostrykin10
- Alexandre Cormier8
- Dave Clements8
- John Chilton8
- Mallory Freeberg8
- Melissa Burke8
- Verena Moosmann8
- Amirhossein Naghsh Nilchi7
- Hans-Rudolf Hotz7
- Kaivan Kamali7
- Katherine Do7
- Morgan Howells7
- Anna Syme6
- Bert Droesbeke6
- Christopher Barnett6
- Clemens Blank6
- Daniela Schneider6
- Ekaterina Polkh6
- Enis Afgan6
- Florian Christoph Sigloch6
- Florian Heyl6
- Linelle Abueg6
- Alex Ostrovsky5
- Alireza Khanteymoori5
- Clea Siguret5
- Diana Chiang Jurado5
- John Davis5
- Tomas Klingström5
- Wandrille Duchemin5
- olisand5
- Catherine Bromhead4
- Coline Royaux4
- Dave B.4
- Eli Chadwick4
- Fotis E. Psomopoulos4
- Laura Leroi4
- Phil Reed4
- Romane LIBOUBAN4
- Solenne Correard4
- Andrea Bagnacani3
- Engy Nasr3
- Erwan Corre3
- Fabio Cumbo3
- Jasper Ouwerkerk3
- Jennifer Hillman-Jackson3
- Joachim Wolff3
- Krzysztof Poterlowicz3
- Maria Christina Maniou3
- Mateo Boudet3
- Mateusz Kuzak3
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Resource type
- e-learning512
- slides99
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Related resource
- Associated Training Datasets363
- Associated Workflows286
- Quarto/RMarkdown Notebook185
- Jupyter Notebook (with Solutions)52
- Jupyter Notebook (without Solutions)52
- ansible19
- git-gat18
- jobs5
- deploying3
- monitoring3
- ro-crate3
- collections2
- cyoa2
- kubernetes2
- networking2
- storage2
- training2
- wireguard2
- workflows2
- Community1
- DDA1
- ENA1
- FAIR1
- SIG1
- apollo21
- authentication1
- automation1
- beacon1
- broken1
- cloud1
- data1
- fair1
- features1
- ga4gh1
- gmod1
- gtn1
- interactive-tools1
- systemd1
- tags1
- terraform1
- tools1
- work-in-progress1
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