Training materials
Content provider: Swiss Institute of Bioinformatics
and Scientific topics: Biomedical informatics
and Target audience: Data Managers
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Video, Training materials, E-learning
Expanding the SPHN RDF Schema
• beginnerComputer science Data management FAIR data Medical informatics Ontology and terminology Data handling Visualisation Ontology visualisation Data editing Clinical data Data semantics FAIR Ontology editing Protegé RDF OWL -
Video, Training materials, E-learning
Training Primer (RDF and SPARQL)
• beginnerOntology and terminology Medical informatics FAIR data Data management Computer science Data retrieval Data handling Database search Query and retrieval Clinical data SPARQL Query data RDF Knowledge graph Triplestore Ontology -
Video, Training materials, E-learning
Semantic Standards
• beginnerComputer science Data management FAIR data Medical informatics Ontology and terminology Data handling Standardisation and normalisation Clinical data Data semantics FAIR Standards Ontology SNOMED CT LOINC ATC CHOP ICD -
Video, Training materials, Mock data, E-learning
RDF Schema and Data Visualization
• beginnerComputer science Data management FAIR data Medical informatics Data visualisation Query and retrieval Data handling Data retrieval Visualisation Ontology visualisation Clinical data SPARQL Data visualization RDF Knowledge graph GraphDB Mock data -
Video, Training materials, E-learning
Validate Graph Data with SHACL
•• intermediateMedical informatics FAIR data Data management Computer science Validation Data handling Clinical data SHACL Data validation RDF Knowledge graph GraphDB RDF graph validation -
Video, Training materials, Mock data, E-learning
How to use Python and R with RDF Data
•• intermediateComputer science Data management FAIR data Medical informatics Query and retrieval Data handling Data retrieval Clinical data SPARQL Query data RDF Knowledge graph Python R GraphDB -
Video, Training materials with mock data, E-learning
Querying Data with SPARQL
• beginnerMedical informatics FAIR data Data management Computer science Data retrieval Data handling Database search Query and retrieval Clinical data SPARQL Query data RDF Knowledge graph SNOMED CT LOINC