Filter

• Sort

• • Most recent Last modified Title descending Title ascending

• Filter Clear filters

• • Scientific topic
  • Exomes33
  • Genome annotation33
  • Genomes33
  • Genomics33
  • Personal genomics33
  • Synthetic genomics33
  • Viral genomics33
  • Whole genomes33
  • Biological sequences27
  • Sequence analysis27
  • Sequence databases27
  • Assembly23
  • Sequence assembly23
  • Algorithms20
  • Computer programming20
  • Data structures20
  • Programming languages20
  • Software development20
  • Software engineering20
  • Community analysis18
  • Environmental microbiology18
  • Metagenomics18
  • Microbial ecology18
  • Microbiome18
  • Molecular community analysis18
  • Shotgun metagenomics18
  • Antimicrobial stewardship16
  • Bayesian methods16
  • Biostatistics16
  • Descriptive statistics16
  • Gaussian processes16
  • Inferential statistics16
  • Markov processes16
  • Medical microbiology16
  • Microbial genetics16
  • Microbial physiology16
  • Microbial surveillance16
  • Microbiological surveillance16
  • Microbiology16
  • Molecular infection biology16
  • Molecular microbiology16
  • Multivariate statistics16
  • Probabilistic graphical model16
  • Probability16
  • Statistics16
  • Statistics and probability16
  • Bottom-up proteomics14
  • Discovery proteomics14
  • MS-based targeted proteomics14
  • MS-based untargeted proteomics14
  • Metaproteomics14
  • Peptide identification14
  • Protein and peptide identification14
  • Proteomics14
  • Quantitative proteomics14
  • Targeted proteomics14
  • Top-down proteomics14
  • Taxonomy13
  • Biodiversity11
  • Comparative transcriptomics11
  • Transcriptome11
  • Transcriptomics11
  • DNA variation10
  • Epigenomics10
  • Genetic variation10
  • Genomic variation10
  • Mutation10
  • Polymorphism10
  • Somatic mutations10
  • Epidemiology6
  • Public health6
  • Public health and epidemiology6
  • DNA metabarcoding5
  • De novo genome sequencing5
  • Environmental metabarcoding5
  • Gene and protein families5
  • Gene families5
  • Gene family5
  • Gene system5
  • Genes, gene family or system5
  • Genome sequencing5
  • Metabarcoding5
  • Protein families5
  • Protein sequence classification5
  • RNA metabarcoding5
  • WGS5
  • Whole genome resequencing5
  • Whole genome sequencing5
  • eDNA metabarcoding5
  • eRNA metabarcoding5
  • Communicable disease4
  • Computational chemistry4
  • Computational ecology4
  • Ecoinformatics4
  • Ecological informatics4
  • Ecology4
  • Ecosystem science4
  • Infectious disease4
  • Metatranscriptomics4
  • Proteogenomics4
  • Show N_FILTERS more
• • Tool
  • Galaxy127
  • FastQC23
  • SAMtools18
  • MultiQC14
  • JBrowse12
  • BEDTools11
  • BWA11
  • fastp11
  • Cutadapt9
  • QUAST9
  • BUSCO8
  • DeepTools8
  • NanoPlot8
  • taxonomy_krona_chart8
  • Falco7
  • kraken27
  • Bandage6
  • STAR6
  • BamTools5
  • Bowtie 25
  • Flye5
  • FreeBayes5
  • GEMINI5
  • Minimap25
  • Trimmomatic5
  • BCFtools4
  • BLAST4
  • Bwa-mem24
  • KrakenTools4
  • MetaPhlAn4
  • ggplot24
  • seqtk4
  • Cardinal3
  • Diamond3
  • GenomeScope 2.03
  • HISAT23
  • Merqury3
  • Newick Utilities3
  • Stacks3
  • Trim Galore3
  • Unicycler3
  • bx-python3
  • gfastats3
  • mothur3
  • scikit-learn3
  • Apollo2
  • Bakta2
  • Biopython2
  • Bracken2
  • ChIPpeakAnno2
  • DESeq22
  • FASTQE2
  • FASTX-Toolkit2
  • GraPhlAn2
  • HUMAnN22
  • InterProScan (EBI)2
  • JBrowse 22
  • MACS2
  • MEGAHIT2
  • Medaka2
  • OMArk2
  • RSeQC2
  • Racon2
  • RepeatMasker2
  • Salmon2
  • SortMeRNA2
  • UCSC Genome Browser Utilities2
  • UMI-tools2
  • Unipept2
  • Vcflib2
  • clusterProfiler2
  • eggNOG-mapper v22
  • ewastools2
  • export2graphlan2
  • funannotate2
  • gffread2
  • humann2
  • lofreq2
  • metaQuantome2
  • msConvert2
  • pyGenomeTracks2
  • pycoQC2
  • snippy2
  • staramr2
  • tbl2gff32
  • ABRicate1
  • AUGUSTUS1
  • Bio3D1
  • Bowtie1
  • COMBAT-TB Workbench1
  • CheckM1
  • Circos1
  • Clair31
  • Clustal 1.8 (Clustal W, Clustal X)1
  • Clustal 2 (Clustal W, Clustal X)1
  • Combine Metaphlan and HUMAnN1
  • CoverM1
  • DropletUtils1
  • FastTree1
  • FeatureCounts1
  • Show N_FILTERS more
• • Content provider
  • Galaxy Training228
  • Show N_FILTERS more
• • Keyword
  • microgalaxy32
  • biodiversity23
  • Galaxy Server administration19
  • Assembly17
  • Contributing to the Galaxy Training Material17
  • Genome Annotation17
  • elixir17
  • Statistics and machine learning16
  • Microbiome15
  • jbrowse115
  • Proteomics14
  • gmod14
  • Development in Galaxy13
  • Using Galaxy and Managing your Data13
  • Introduction to Galaxy Analyses12
  • Transcriptomics11
  • ai-ml11
  • work-in-progress11
  • Epigenetics10
  • Variant Analysis10
  • ansible10
  • jupyter-notebook10
  • prokaryote10
  • eukaryote9
  • git-gat9
  • assembly8
  • Sequence analysis7
  • Teaching and Hosting Galaxy training7
  • DDA6
  • Foundations of Data Science6
  • nanopore6
  • train-the-trainers6
  • Large Language Model5
  • Single Cell5
  • collections5
  • covid195
  • metagenomics5
  • plants5
  • 16S4
  • Computational chemistry4
  • Ecology4
  • illumina4
  • interactive-tools4
  • metabarcoding4
  • one-health4
  • ChIP-seq3
  • EBV dataset3
  • Galaxy Community Building3
  • Genetic composition EBV class3
  • Metabolomics3
  • QC3
  • RAD-seq3
  • amr3
  • apollo23
  • bacteria3
  • cyoa3
  • metatranscriptomics3
  • monitoring3
  • pacbio3
  • workflows3
  • Climate2
  • EBV workflow2
  • HeLa2
  • VGP2
  • Visualisation2
  • deploying2
  • eukaryota2
  • human2
  • jobs2
  • maker2
  • mouse2
  • storage2
  • 10x1
  • Braker31
  • Community1
  • EBV workflowz1
  • Evolution1
  • FAIR1
  • FAIR Learning Objects1
  • FAIR-by-Design Learning Materials1
  • FAIR-by-Design Methodology1
  • Heatmap1
  • MIGHTS1
  • Machine learning1
  • Nanopore data analysis1
  • Pan-cancer1
  • Pathogens detection1
  • Phylogenetic tree1
  • R1
  • SIG1
  • SILAC1
  • SQL1
  • Species population EBV class1
  • Species populations EBV class1
  • animals1
  • annotation1
  • authentication1
  • beer1
  • binning1
  • broken1
  • Show N_FILTERS more
• • Difficulty level
  • Beginner183
  • Intermediate39
  • Advanced6
  • Show N_FILTERS more
• • Licence
  • Creative Commons Attribution 4.0 International228
  • Show N_FILTERS more
• • Target audience
  • Students169
  • Galaxy Administrators32
  • Instructors27
  • Show N_FILTERS more
• • Author
  • Bérénice Batut73
  • Helena Rasche40
  • Björn Grüning31
  • Saskia Hiltemann29
  • Anthony Bretaudeau18
  • Anton Nekrutenko16
  • Fotis E. Psomopoulos11
  • Nicola Soranzo11
  • Simon Gladman11
  • Dave Clements9
  • Delphine Lariviere9
  • Nate Coraor9
  • Anika Erxleben8
  • Cristóbal Gallardo8
  • Wolfgang Maier8
  • Anne Pajon7
  • Florian Christoph Sigloch7
  • Joachim Wolff7
  • Paul Zierep7
  • Allegra Via6
  • Anna Syme6
  • ELIXIR Goblet Train the Trainers6
  • Nadia Goué6
  • Patricia Palagi6
  • Pratik Jagtap6
  • Raphael Mourad6
  • Subina Mehta6
  • Alexandre Cormier5
  • Christopher Barnett5
  • Clemens Blank5
  • Emma Leith5
  • Erwan Corre5
  • Laura Leroi5
  • Simon Bray5
  • Stéphanie Robin5
  • Wendi Bacon5
  • Yvan Le Bras5
  • Alex Ostrovsky4
  • Anne Fouilloux4
  • Bazante Sanders4
  • John Chilton4
  • Mallory Freeberg4
  • Maria Doyle4
  • Mehmet Tekman4
  • Melanie Föll4
  • Pavankumar Videm4
  • Praveen Kumar4
  • Timothy J. Griffin4
  • Vivek Bhardwaj4
  • Anup Kumar3
  • Cyril Monjeaud3
  • Daniel Blankenberg3
  • Engy Nasr3
  • Fidel Ramirez3
  • Gianmauro Cuccuru3
  • Lisanna Paladin3
  • Marie Crane3
  • Marius van den Beek3
  • Martin Čech3
  • Mo Heydarian3
  • Youri Hoogstrate3
  • Andrea Bagnacani2
  • Avans Hogeschool2
  • Aysam Guerler2
  • Brandon Pickett2
  • Clea Siguret2
  • Dannon Baker2
  • Ekaterina Polkh2
  • Friederike Dündar2
  • Hans-Rudolf Hotz2
  • Katarzyna Kamieniecka2
  • Khaled Jum'ah2
  • Krzysztof Poterlowicz2
  • Leily Rabbani2
  • Linelle Abueg2
  • Lucille Delisle2
  • Michele Maroni2
  • Olha Nahorna2
  • Peter van Heusden2
  • Polina Polunina2
  • Ralf Gabriels2
  • Ray Sajulga2
  • Romane LIBOUBAN2
  • Sophia Hampe2
  • Teresa Müller2
  • Tharindu Senapathi2
  • The Carpentries2
  • Toby Hodges2
  • Torsten Seemann2
  • Wandrille Duchemin2
  • Achim Winandi1
  • Ahmed Hamid Awan1
  • Alaa Elghamry1
  • Anastas Mishev1
  • Ava Hoffman1
  • Beatriz Serrano-Solano1
  • Belinda Phipson1
  • Brigida Gallone1
  • Cameron Hyde1
  • Carolin Leister1
  • Show N_FILTERS more
• • Contributor
  • Bérénice Batut
  • Saskia Hiltemann520
  • Helena Rasche466
  • Björn Grüning378
  • Nicola Soranzo147
  • Martin Čech113
  • Anthony Bretaudeau103
  • Cristóbal Gallardo95
  • Niall Beard80
  • Wendi Bacon72
  • Nate Coraor61
  • Armin Dadras60
  • Gildas Le Corguillé57
  • Marius van den Beek55
  • William Durand55
  • Mehmet Tekman44
  • Teresa Müller44
  • Simon Gladman43
  • Lucille Delisle41
  • Yvan Le Bras37
  • Pavankumar Videm36
  • Wolfgang Maier36
  • Melanie Föll34
  • Beatriz Serrano-Solano32
  • Simon Bray28
  • Anup Kumar25
  • Subina Mehta25
  • Donny Vrins23
  • Maria Doyle23
  • Peter van Heusden23
  • Anne Fouilloux20
  • Julia Jakiela20
  • Bazante Sanders19
  • Anton Nekrutenko17
  • Khaled Jum'ah17
  • Deepti Varshney16
  • Mélanie Petera14
  • Marie Josse13
  • Pratik Jagtap13
  • Timothy J. Griffin13
  • Matthias Bernt12
  • Pablo Moreno12
  • Paul Zierep12
  • David López11
  • Delphine Lariviere11
  • Katarzyna Kamieniecka11
  • Marisa Loach11
  • Mira Kuntz11
  • Stéphanie Robin11
  • Gianmauro Cuccuru10
  • Leonid Kostrykin10
  • Alexandre Cormier8
  • Dave Clements8
  • John Chilton8
  • Mallory Freeberg8
  • Melissa Burke8
  • Verena Moosmann8
  • Hans-Rudolf Hotz7
  • Kaivan Kamali7
  • Katherine Do7
  • Morgan Howells7
  • Anna Syme6
  • Bert Droesbeke6
  • Christopher Barnett6
  • Clemens Blank6
  • Ekaterina Polkh6
  • Enis Afgan6
  • Florian Christoph Sigloch6
  • Florian Heyl6
  • Linelle Abueg6
  • Alex Ostrovsky5
  • Alireza Khanteymoori5
  • Clea Siguret5
  • John Davis5
  • Tomas Klingström5
  • Wandrille Duchemin5
  • olisand5
  • Catherine Bromhead4
  • Coline Royaux4
  • Daniela Schneider4
  • Dave B.4
  • Diana Chiang Jurado4
  • Eli Chadwick4
  • Fotis E. Psomopoulos4
  • Laura Leroi4
  • Phil Reed4
  • Romane LIBOUBAN4
  • Solenne Correard4
  • Amirhossein Naghsh Nilchi3
  • Andrea Bagnacani3
  • Engy Nasr3
  • Erwan Corre3
  • Fabio Cumbo3
  • Jasper Ouwerkerk3
  • Jennifer Hillman-Jackson3
  • Joachim Wolff3
  • Krzysztof Poterlowicz3
  • Maria Christina Maniou3
  • Mateo Boudet3
  • Mateusz Kuzak3
  • Show N_FILTERS more
• • Resource type
  • e-learning192
  • slides36
  • Show N_FILTERS more
• • Related resource
  • Associated Training Datasets145
  • Associated Workflows114
  • Quarto/RMarkdown Notebook78
  • Jupyter Notebook (with Solutions)12
  • Jupyter Notebook (without Solutions)12
  • ansible10
  • git-gat9
  • monitoring3
  • collections2
  • deploying2
  • jobs2
  • storage2
  • Community1
  • DDA1
  • SIG1
  • apollo21
  • authentication1
  • broken1
  • cloud1
  • features1
  • gmod1
  • tags1
  • terraform1
  • tools1
  • work-in-progress1
  • workflows1
  • Show N_FILTERS more
• Show disabled materials
• Show archived materials
• • Date added
  • In the last 24 hours
  • In the last 1 week
  • In the last 1 month