Training materials
-
e-learning
3: RNA-seq genes to pathways
• beginnerTranscriptomics mouse -
e-learning
2: RNA-seq counts to genes
• beginnerTranscriptomics QC limma-voom mouse -
e-learning
Fine tune large protein model (ProtTrans) using HuggingFace
• beginnerStatistics and probability Statistics and machine learning deep-learning dephosphorylation-site-prediction fine-tuning interactive-tools jupyter-lab machine-learning -
e-learning
Text-mining with the SimText toolset
• beginnerStatistics and probability Statistics and machine learning interactive-tools -
e-learning
A Docker-based interactive Jupyterlab powered by GPU for artificial intelligence in Galaxy
• beginnerStatistics and probability Statistics and machine learning deep-learning image-segmentation interactive-tools jupyter-lab machine-learning protein-3D-structure -
e-learning
Tree thinking for tuberculosis evolution and epidemiology
• beginnerEvolutionary biology Genomics Microbiology Phylogeny Infectious disease Evolution microgalaxy one-health phylogenetics prokaryote -
e-learning
Introduction to Image Analysis using Galaxy
• beginnerImaging HeLa -
e-learning
Removing the effects of the cell cycle
• beginnerSingle Cell -
e-learning
Pre-processing of 10X Single-Cell ATAC-seq Datasets
• beginner10x Single Cell epigenetics -
e-learning
Filter, plot, and explore single cell RNA-seq data with Seurat
• beginnerMIGHTS Single Cell paper-replication