Filter

• Sort

• • Most recent Last modified Title descending Title ascending

• Filter Clear filters

• • Scientific topic
  • Exomes33
  • Genome annotation33
  • Genomes33
  • Genomics33
  • Personal genomics33
  • Synthetic genomics33
  • Viral genomics33
  • Whole genomes33
  • Algorithms27
  • Bayesian methods27
  • Biostatistics27
  • Bottom-up proteomics27
  • Computer programming27
  • Data structures27
  • Descriptive statistics27
  • Discovery proteomics27
  • Gaussian processes27
  • Inferential statistics27
  • MS-based targeted proteomics27
  • MS-based untargeted proteomics27
  • Markov processes27
  • Metaproteomics27
  • Multivariate statistics27
  • Peptide identification27
  • Probabilistic graphical model27
  • Probability27
  • Programming languages27
  • Protein and peptide identification27
  • Proteomics27
  • Quantitative proteomics27
  • Software development27
  • Software engineering27
  • Statistics27
  • Statistics and probability27
  • Targeted proteomics27
  • Top-down proteomics27
  • Assembly22
  • Sequence assembly22
  • Biological sequences21
  • Sequence analysis21
  • Sequence databases21
  • Comparative transcriptomics20
  • Transcriptome20
  • Transcriptomics20
  • Antimicrobial stewardship17
  • Medical microbiology17
  • Microbial genetics17
  • Microbial physiology17
  • Microbial surveillance17
  • Microbiological surveillance17
  • Microbiology17
  • Molecular infection biology17
  • Molecular microbiology17
  • DNA variation15
  • Genetic variation15
  • Genomic variation15
  • Mutation15
  • Polymorphism15
  • Somatic mutations15
  • Community analysis14
  • Computational ecology14
  • Ecoinformatics14
  • Ecological informatics14
  • Ecology14
  • Ecosystem science14
  • Environmental microbiology14
  • Metagenomics14
  • Microbial ecology14
  • Microbiome14
  • Molecular community analysis14
  • Shotgun metagenomics14
  • Epigenomics12
  • Biodiversity10
  • Diffraction experiment9
  • Imaging9
  • Microscopy9
  • Microscopy imaging9
  • Optical super resolution microscopy9
  • Photonic force microscopy9
  • Photonic microscopy9
  • Taxonomy9
  • Computational chemistry7
  • Epidemiology6
  • Exometabolomics6
  • LC-MS-based metabolomics6
  • MS-based metabolomics6
  • MS-based targeted metabolomics6
  • MS-based untargeted metabolomics6
  • Mass spectrometry-based metabolomics6
  • Metabolites6
  • Metabolome6
  • Metabolomics6
  • Metabonomics6
  • NMR-based metabolomics6
  • Public health6
  • Public health and epidemiology6
  • Communicable disease5
  • De novo genome sequencing5
  • Genome sequencing5
  • Infectious disease5
  • Show N_FILTERS more
• • Tool
  • Galaxy236
  • FastQC27
  • SAMtools23
  • MultiQC19
  • BWA16
  • BEDTools14
  • Cutadapt12
  • JBrowse12
  • SCANPY12
  • fastp12
  • DeepTools11
  • scikit-learn10
  • Falco9
  • STAR9
  • QUAST8
  • ggplot28
  • BCFtools7
  • BUSCO7
  • BamTools7
  • FreeBayes7
  • NanoPlot7
  • Trimmomatic7
  • taxonomy_krona_chart7
  • Bowtie 26
  • GEMINI6
  • Galaxy Image Analysis6
  • scikit-image6
  • Bandage5
  • Galactic Circos5
  • HISAT25
  • RSeQC5
  • Trim Galore5
  • gffread5
  • kraken25
  • msConvert5
  • BLAST4
  • Bwa-mem24
  • Flye4
  • MACS4
  • MaxQuant4
  • MetaPhlAn4
  • Minimap24
  • SRA Software Toolkit4
  • Workflow4Metabolomics4
  • anndata4
  • pyGenomeTracks4
  • seqtk4
  • xcms4
  • Biopython3
  • Cardinal3
  • Diamond3
  • DropletUtils3
  • FASTX-Toolkit3
  • GOseq3
  • GraPhlAn3
  • InterProScan (EBI)3
  • MSstats3
  • Merqury3
  • MuSiC suite: PoPMuSiC, HoTMuSiC, and SNPMuSiC3
  • Open Babel3
  • Salmon3
  • SortMeRNA3
  • Stacks3
  • StringTie3
  • The Protein Data Bank (PDB)3
  • Unicycler3
  • Vcflib3
  • annotatemyids3
  • export2graphlan3
  • gfastats3
  • gffcompare3
  • humann3
  • lofreq3
  • snippy3
  • snpEff3
  • Apollo2
  • Bakta2
  • Bio3D2
  • COMBAT-TB Workbench2
  • CellProfiler2
  • ChIPpeakAnno2
  • Circos2
  • Combine Metaphlan and HUMAnN2
  • DESeq22
  • European Nucleotide Archive (ENA)2
  • FASTQE2
  • FeatureCounts2
  • GOEnrichment2
  • GenomeScope 2.02
  • Gromacs2
  • HUMAnN22
  • Helixer2
  • IsoformSwitchAnalyzeR2
  • JBrowse 22
  • KrakenTools2
  • MDAnalysis2
  • MEME2
  • Newick Utilities2
  • OMArk2
  • PfamScan2
  • Show N_FILTERS more
• • Content provider
  • Galaxy Training386
  • Show N_FILTERS more
• • Keyword
  • Galaxy Server administration41
  • Single Cell37
  • biodiversity29
  • Proteomics27
  • microgalaxy27
  • Statistics and machine learning26
  • Using Galaxy and Managing your Data21
  • Contributing to the Galaxy Training Material20
  • Transcriptomics20
  • jupyter-notebook18
  • Assembly17
  • Development in Galaxy17
  • Genome Annotation17
  • Variant Analysis15
  • ansible15
  • Ecology14
  • git-gat14
  • jbrowse114
  • interactive-tools13
  • Epigenetics12
  • Introduction to Galaxy Analyses12
  • earth-system12
  • paper-replication12
  • MIGHTS11
  • Microbiome11
  • Teaching and Hosting Galaxy training11
  • gmod11
  • elixir10
  • prokaryote10
  • Climate9
  • FAIR Data, Workflows, and Research9
  • Foundations of Data Science9
  • Imaging9
  • eukaryote9
  • work-in-progress9
  • DDA8
  • ocean8
  • one-health8
  • Computational chemistry7
  • assembly7
  • covid197
  • cyoa7
  • plants7
  • workflows7
  • 10x6
  • Metabolomics6
  • Sequence analysis6
  • Visualisation6
  • data stewardship6
  • fair6
  • EBV dataset5
  • EBV workflow5
  • Large Language Model5
  • ai-ml5
  • collections5
  • dmp5
  • jobs5
  • train-the-trainers5
  • transcriptomics5
  • DIA4
  • HeLa4
  • QC4
  • illumina4
  • mouse4
  • nanopore4
  • storage4
  • ChIP-seq3
  • FAIR3
  • Genetic composition EBV class3
  • RAD-seq3
  • amr3
  • bacteria3
  • bioimaging3
  • data import3
  • data management3
  • deploying3
  • monitoring3
  • pacbio3
  • proteogenomics3
  • ro-crate3
  • virology3
  • 16S2
  • Data Paper2
  • Digital Humanities2
  • EML2
  • Evolution2
  • Metadata2
  • Species population EBV class2
  • Species populations EBV class2
  • VGP2
  • apollo22
  • bulk2
  • deep-learning2
  • epigenetics2
  • essential genes2
  • eukaryota2
  • human2
  • jupyter-lab2
  • kubernetes2
  • label-free2
  • Show N_FILTERS more
• • Difficulty level
  • Beginner311
  • Intermediate66
  • Advanced9
  • Show N_FILTERS more
• • Licence
  • Creative Commons Attribution 4.0 International386
  • Show N_FILTERS more
• • Target audience
  • Students296
  • Galaxy Administrators58
  • Instructors32
  • Show N_FILTERS more
• • Author
  • Bérénice Batut68
  • Helena Rasche66
  • Björn Grüning40
  • Saskia Hiltemann40
  • Anton Nekrutenko22
  • Anthony Bretaudeau19
  • Simon Gladman18
  • Nicola Soranzo17
  • Nate Coraor14
  • Yvan Le Bras14
  • Mehmet Tekman13
  • Cristóbal Gallardo12
  • Marie Josse12
  • Wendi Bacon12
  • Anup Kumar11
  • Melanie Föll11
  • Pratik Jagtap11
  • Simon Bray11
  • Subina Mehta11
  • Anne Fouilloux10
  • Delphine Lariviere10
  • Fotis E. Psomopoulos10
  • Maria Doyle10
  • Wolfgang Maier10
  • Julia Jakiela9
  • Pavankumar Videm9
  • Anika Erxleben8
  • Daniel Blankenberg8
  • Dave Clements8
  • Katarzyna Kamieniecka8
  • Khaled Jum'ah8
  • Krzysztof Poterlowicz8
  • Timothy J. Griffin8
  • Florian Christoph Sigloch7
  • Joachim Wolff7
  • Marius van den Beek7
  • Matthias Fahrner7
  • Praveen Kumar7
  • Stéphanie Robin7
  • Alex Ostrovsky6
  • Anne Pajon6
  • Christopher Barnett6
  • Emma Leith6
  • Erwan Corre6
  • Morgan Howells6
  • Nadia Goué6
  • Alexandre Cormier5
  • Allegra Via5
  • Andrew Mason5
  • Anna Syme5
  • Branka Franicevic5
  • Clemens Blank5
  • ELIXIR Goblet Train the Trainers5
  • James Johnson5
  • John Chilton5
  • Kellie Snow5
  • Korneel Hens5
  • Laura Cooper5
  • Laura Leroi5
  • Leonid Kostrykin5
  • Martin Čech5
  • Munazah Andrabi5
  • Nick Juty5
  • Patricia Palagi5
  • Philippe Rocca-Serra5
  • Raphael Mourad5
  • Ray Sajulga5
  • Robert Andrews5
  • Sara Morsy5
  • Saskia Lawson-Tovey5
  • Xenia Perez Sitja5
  • Alireza Khanteymoori4
  • Amirhossein Naghsh Nilchi4
  • Bazante Sanders4
  • Beatriz Serrano-Solano4
  • Diana Chiang Jurado4
  • Lucille Delisle4
  • Mallory Freeberg4
  • Mira Kuntz4
  • Paul Zierep4
  • Vivek Bhardwaj4
  • Belinda Phipson3
  • Cyril Monjeaud3
  • Engy Nasr3
  • Enis Afgan3
  • Fidel Ramirez3
  • Florian Heyl3
  • Gianmauro Cuccuru3
  • Gildas Le Corguillé3
  • Hans-Rudolf Hotz3
  • Jean-François Martin3
  • John Davis3
  • Laila Los3
  • Marie Crane3
  • Marisa Loach3
  • Mo Heydarian3
  • Mélanie Petera3
  • Nuwan Goonasekera3
  • Riccardo Massei3
  • Tharindu Senapathi3
  • Show N_FILTERS more
• • Contributor
  • Björn Grüning
  • Saskia Hiltemann523
  • Helena Rasche466
  • Bérénice Batut228
  • Nicola Soranzo147
  • Martin Čech113
  • Anthony Bretaudeau103
  • Cristóbal Gallardo95
  • Niall Beard80
  • Wendi Bacon72
  • Nate Coraor61
  • Armin Dadras60
  • Gildas Le Corguillé57
  • Marius van den Beek55
  • William Durand55
  • Mehmet Tekman44
  • Teresa Müller44
  • Simon Gladman43
  • Lucille Delisle41
  • Pavankumar Videm37
  • Yvan Le Bras37
  • Wolfgang Maier36
  • Melanie Föll34
  • Beatriz Serrano-Solano32
  • Simon Bray28
  • Anup Kumar26
  • Subina Mehta25
  • Donny Vrins24
  • Maria Doyle23
  • Peter van Heusden23
  • Anne Fouilloux20
  • Julia Jakiela20
  • Bazante Sanders19
  • Anton Nekrutenko17
  • Khaled Jum'ah17
  • Deepti Varshney16
  • Marie Josse14
  • Mélanie Petera14
  • Pratik Jagtap13
  • Timothy J. Griffin13
  • Matthias Bernt12
  • Mira Kuntz12
  • Pablo Moreno12
  • Paul Zierep12
  • David López11
  • Delphine Lariviere11
  • Katarzyna Kamieniecka11
  • Marisa Loach11
  • Stéphanie Robin11
  • Gianmauro Cuccuru10
  • Leonid Kostrykin10
  • Alexandre Cormier8
  • Dave Clements8
  • John Chilton8
  • Mallory Freeberg8
  • Melissa Burke8
  • Verena Moosmann8
  • Amirhossein Naghsh Nilchi7
  • Hans-Rudolf Hotz7
  • Kaivan Kamali7
  • Katherine Do7
  • Morgan Howells7
  • Anna Syme6
  • Bert Droesbeke6
  • Christopher Barnett6
  • Clemens Blank6
  • Daniela Schneider6
  • Ekaterina Polkh6
  • Enis Afgan6
  • Florian Christoph Sigloch6
  • Florian Heyl6
  • Linelle Abueg6
  • Alex Ostrovsky5
  • Alireza Khanteymoori5
  • Clea Siguret5
  • Diana Chiang Jurado5
  • John Davis5
  • Tomas Klingström5
  • Wandrille Duchemin5
  • olisand5
  • Catherine Bromhead4
  • Coline Royaux4
  • Dave B.4
  • Eli Chadwick4
  • Fotis E. Psomopoulos4
  • Laura Leroi4
  • Phil Reed4
  • Romane LIBOUBAN4
  • Solenne Correard4
  • Andrea Bagnacani3
  • Engy Nasr3
  • Erwan Corre3
  • Fabio Cumbo3
  • Jasper Ouwerkerk3
  • Jennifer Hillman-Jackson3
  • Joachim Wolff3
  • Krzysztof Poterlowicz3
  • Maria Christina Maniou3
  • Mateo Boudet3
  • Mateusz Kuzak3
  • Show N_FILTERS more
• • Resource type
  • e-learning328
  • slides58
  • Show N_FILTERS more
• • Related resource
  • Associated Training Datasets244
  • Associated Workflows206
  • Quarto/RMarkdown Notebook116
  • Jupyter Notebook (with Solutions)16
  • Jupyter Notebook (without Solutions)16
  • ansible16
  • git-gat14
  • jobs5
  • monitoring3
  • collections2
  • deploying2
  • kubernetes2
  • storage2
  • workflows2
  • DDA1
  • authentication1
  • automation1
  • broken1
  • cloud1
  • cyoa1
  • features1
  • interactive-tools1
  • ro-crate1
  • tags1
  • terraform1
  • tools1
  • training1
  • Show N_FILTERS more
• Show disabled materials
• Show archived materials
• • Date added
  • In the last 24 hours
  • In the last 1 week
  • In the last 1 month