Training materials
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e-learning
Voronoi segmentation
• beginnerImaging imageanalysis segmentation voronoi -
e-learning
Parameter tuning and optimization - Evaluating nuclei segmentation with Galaxy
• beginnerImaging bioimaging -
e-learning
Using BioImage.IO models for image analysis in Galaxy
• beginnerImaging AI bioimaging -
e-learning
Quantification of single-molecule RNA fluorescence in situ hybridization (smFISH) in yeast cell lines
• beginnerImaging RNA bioimaging smFISH -
e-learning
Tracking of mitochondria and capturing mitoflashes
• beginnerImaging bioimaging mitochondria mitoflash -
e-learning
Genome-wide alternative splicing analysis
••• advancedTranscriptomics alternative splicing isoform switching -
e-learning
Network analysis with Heinz
• beginnerTranscriptomics metatranscriptomics network analysis -
e-learning
Metabarcoding/eDNA through Obitools
• beginnerEcology Community composition EBV class EBV dataset EBV workflow Genetic composition EBV class Metabarcoding biodiversity eDNA -
e-learning
Genome Assembly Quality Control
•• intermediateSequence assembly Biodiversity Data quality management Assembly assembly biodiversity quality control -
e-learning
Identification of the micro-organisms in a beer using Nanopore sequencing
• beginnerMetagenomics Microbial ecology Taxonomy Sequence analysis Microbiome beer citizen science metagenomics microgalaxy nanopore