Training materials
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e-learning
Using the VGP workflows to assemble a vertebrate genome with HiFi and Hi-C data
•• intermediateSequence assembly Chromosome conformation capture Assembly VGP biodiversity eukaryote pacbio -
e-learning
Vertebrate genome assembly using HiFi, Bionano and Hi-C data - Step by Step
•• intermediateSequence assembly Genomics Biodiversity Assembly VGP biodiversity eukaryote pacbio -
e-learning
Chloroplast genome assembly
• beginnerSequence assembly Assembly biodiversity jbrowse1 nanopore plants -
e-learning
Large genome assembly and polishing
• beginnerSequence assembly Genomics Biodiversity Assembly assembly biodiversity nanopore plants polishing -
e-learning
Genome annotation with Prokka
• beginnerGenomics Microbiology Gene and protein families Sequence analysis Genome Annotation gmod jbrowse1 microgalaxy prokaryote -
e-learning
An Introduction to Genome Assembly
• beginnerSequence assembly Assembly -
Slides, course materials
Introduction to using cloud and containers for training - OpenStack and Docker oriented view
Cloud computing Containers
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course materials, Training materials, Documentation
ELIXIR eLearning definitions
eLearning training EeLP
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course materials, Training materials, Slides, Video
RNA-seq data analysis using Chipster
Genomics Transcriptomics transcriptomics RNA-Seq eLearning EeLP
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course materials, Video
Single cell RNA-seq data analysis with Chipster
• beginnerRNA-Seq RNA-Seq Single Cell technologies scRNA-seq
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