Training materials
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e-learning
Collaboration with JupyterGIS
• beginnerClimate -
slides
Galaxy Administrator Time Burden and Technology Usage
• beginnerGalaxy Server administration deploying maintenance survey -
e-learning
Metabarcoding/eDNA through Obitools
• beginnerEcology Community composition EBV class EBV dataset EBV workflow Genetic composition EBV class Metabarcoding biodiversity eDNA -
e-learning
Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition
• beginnerMetagenomics Microbial ecology Public health and epidemiology Taxonomy Sequence assembly Pathology Sequence analysis Heatmap Microbiome Nanopore data analysis … -
e-learning
RNA Seq Counts to Viz in R
• beginnerTranscriptomics interactive-tools -
e-learning
Pre-processing of 10X Single-Cell RNA Datasets
• beginner10x Single Cell -
e-learning
JupyterLab in Galaxy
• beginnerUsing Galaxy and Managing your Data interactive-tools -
e-learning
Functionally Assembled Terrestrial Ecosystem Simulator (FATES) with Galaxy Climate JupyterLab
• beginnerClimate interactive-tools -
e-learning
Pangeo ecosystem 101 for everyone - Introduction to Xarray Galaxy Tools
• beginnerClimate pangeo -
e-learning
Pangeo Notebook in Galaxy - Introduction to Xarray
• beginnerClimate interactive-tools jupyter-notebook pangeo