Training materials
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slides
Galaxy Administrator Time Burden and Technology Usage
• beginnerGalaxy Server administration deploying maintenance survey -
e-learning
Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition
• beginnerMetagenomics Microbial ecology Public health and epidemiology Taxonomy Sequence assembly Pathology Sequence analysis Heatmap Microbiome Nanopore data analysis … -
e-learning
Pre-processing of 10X Single-Cell RNA Datasets
• beginner10x Single Cell -
e-learning
ATAC-Seq data analysis
• beginnerEpigenomics Epigenetics -
e-learning
Clustering 3K PBMCs with Scanpy
• beginner10x Single Cell -
e-learning
From peaks to genes
• beginnerIntroduction to Galaxy Analyses -
e-learning
Reference-based RNA-Seq data analysis
• beginnerTranscriptomics QC bulk collections cyoa drosophila rna-seq -
Video, Training materials, E-learning
Expanding the SPHN RDF Schema
• beginnerComputer science Data management FAIR data Medical informatics Ontology and terminology Data handling Visualisation Ontology visualisation Data editing Clinical data … -
Video, Training materials, E-learning
Training Primer (RDF and SPARQL)
• beginnerOntology and terminology Medical informatics FAIR data Data management Computer science Data retrieval Data handling Database search Query and retrieval Clinical data … -
Video, Training materials, E-learning
Semantic Standards
• beginnerComputer science Data management FAIR data Medical informatics Ontology and terminology Data handling Standardisation and normalisation Clinical data Data semantics FAIR …
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