Training materials
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e-learning
Identification of AMR genes in an assembled bacterial genome
• beginnerWhole genome sequencing Public health and epidemiology Genomics Microbiology Sequence analysis Infectious disease Antimicrobial resistance Genome Annotation amr gmod … -
e-learning
Genome annotation with Maker
••• advancedGenome Annotation eukaryote gmod jbrowse1 maker -
e-learning
Genome Annotation
• beginnerGenome Annotation prokaryote work-in-progress -
e-learning
Creating an Official Gene Set
• beginnerGenome Annotation apollo2 gmod work-in-progress -
e-learning
Bacterial Genome Annotation
• beginnerGenomics Microbiology Gene and protein families Sequence analysis Whole genome sequencing Functional genomics Mobile genetic elements Genome Annotation bacteria gmod … -
e-learning
Refining Genome Annotations with Apollo (eukaryotes)
•• intermediateGenome Annotation apollo2 cyoa eukaryote gmod jbrowse1 -
slides
Refining Genome Annotations with Apollo
• beginnerGenome Annotation prokaryote -
e-learning
Genome annotation with Prokka
• beginnerGenomics Microbiology Gene and protein families Sequence analysis Genome Annotation gmod jbrowse1 microgalaxy prokaryote -
e-learning
From small to large-scale genome comparison
• beginnerGenome Annotation plants prokaryote -
slides
High Performance Computing for Pairwise Genome Comparison
• beginnerGenome Annotation