Please note: This instance is for testing/development, and any content submitted may be changed or deleted without warning.
Training eSupport System
  • Log In
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Trainers
    • Providers
    • Nodes

TeSS makes use of some necessary cookies to provide its core functionality.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Scientific topic
    • Comparative transcriptomics2
    • Diffraction experiment2
    • Epigenomics2
    • Imaging2
    • Microscopy2
    • Microscopy imaging2
    • Optical super resolution microscopy2
    • Photonic force microscopy2
    • Photonic microscopy2
    • Transcriptome2
    • Transcriptomics2
    • Biological sequences1
    • Computational chemistry1
    • DNA variation1
    • Genetic linkage1
    • Genetic variation1
    • Genomic variation1
    • Linkage1
    • Linkage mapping1
    • Mapping1
    • Mutation1
    • Polymorphism1
    • Sequence analysis1
    • Sequence databases1
    • Somatic mutations1
    • Synteny1
    • Show N_FILTERS more
    • Tool
    • Galaxy35
    • SCANPY11
    • FastQC6
    • SAMtools6
    • MultiQC5
    • MuSiC suite: PoPMuSiC, HoTMuSiC, and SNPMuSiC4
    • BWA3
    • DropletUtils3
    • FASTX-Toolkit3
    • STAR3
    • anndata3
    • Cutadapt2
    • Falco2
    • RSeQC2
    • RStudio2
    • annotatemyids2
    • snpEff2
    • Alevin1
    • BEDTools1
    • BamTools1
    • Biopython1
    • Bwa-mem21
    • ChEMBL1
    • ChIPpeakAnno1
    • DESeq21
    • FREEC1
    • FeatureCounts1
    • FreeBayes1
    • GOseq1
    • Galactic Circos1
    • HISAT21
    • HiCExplorer1
    • JBrowse1
    • MACS1
    • Open Babel1
    • R1
    • SRA Software Toolkit1
    • Salmon1
    • Subread1
    • The Protein Data Bank (PDB)1
    • Trimmomatic1
    • UMI-tools1
    • clusterProfiler1
    • epiScanpy1
    • ewastools1
    • fastp1
    • ggplot21
    • lofreq1
    • pathview1
    • pyGenomeTracks1
    • Show N_FILTERS more
    • Content provider
    • Galaxy Training60
    • Show N_FILTERS more
    • Keyword
    • Single Cell31
    • fair13
    • FAIR Data, Workflows, and Research11
    • paper-replication11
    • MIGHTS10
    • data stewardship9
    • data management7
    • dmp7
    • jupyter-notebook5
    • 10x4
    • Introduction to Galaxy Analyses4
    • data import3
    • open3
    • transcriptomics3
    • work-in-progress3
    • Epigenetics2
    • Imaging2
    • QC2
    • Teaching and Hosting Galaxy training2
    • Transcriptomics2
    • bioimaging2
    • collections2
    • cyoa2
    • rmarkdown-notebook2
    • Computational chemistry1
    • Contributing to the Galaxy Training Material1
    • ENA1
    • FAIR1
    • Galaxy Server administration1
    • Sequence analysis1
    • Using Galaxy and Managing your Data1
    • Variant Analysis1
    • bulk1
    • computational-chemistry1
    • covid191
    • data management plan1
    • data-management1
    • drosophila1
    • epigenetics1
    • español1
    • medicinal-chemistry1
    • mouse1
    • ncbi1
    • plants1
    • rna-seq1
    • Show N_FILTERS more
    • Difficulty level
    • Beginner59
    • Intermediate1
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International60
    • Show N_FILTERS more
    • Target audience
    • Students56
    • Instructors3
    • Galaxy Administrators1
    • Show N_FILTERS more
    • Author
    • Katarzyna Kamieniecka14
    • Krzysztof Poterlowicz14
    • Mehmet Tekman14
    • Wendi Bacon13
    • Julia Jakiela12
    • Nicola Soranzo9
    • Khaled Jum'ah8
    • Laura Cooper7
    • Robert Andrews7
    • Andrew Mason6
    • Branka Franicevic6
    • Philippe Rocca-Serra6
    • Sara Morsy6
    • Xenia Perez Sitja6
    • Bérénice Batut5
    • Helena Rasche5
    • Kellie Snow5
    • Korneel Hens5
    • Munazah Andrabi5
    • Nick Juty5
    • Pavankumar Videm5
    • Saskia Lawson-Tovey5
    • Morgan Howells4
    • Alex Ostrovsky2
    • Anika Erxleben2
    • Daniel Blankenberg2
    • Hans-Rudolf Hotz2
    • Joachim Wolff2
    • Maria Doyle2
    • Marisa Loach2
    • Saskia Hiltemann2
    • Wolfgang Maier2
    • Adelaide Rhodes1
    • Ahmed Hamid Awan1
    • Anna Syme1
    • Anne Fouilloux1
    • Anton Nekrutenko1
    • Beatriz Serrano-Solano1
    • Belinda Phipson1
    • Björn Grüning1
    • Camila Goclowski1
    • Clemens Blank1
    • Cristóbal Gallardo1
    • Dave Clements1
    • David Salgado1
    • Diana Chiang Jurado1
    • Ekaterina Polkh1
    • Emily Angiolini1
    • Fidel Ramirez1
    • Gabriela Lopez-Gonzalez1
    • Graham Etherington1
    • Harriet Dashnow1
    • Jon Trow1
    • Jonathan Manning1
    • Lucille Delisle1
    • Mallory Freeberg1
    • Marius van den Beek1
    • Melanie Föll1
    • Mo Heydarian1
    • Nate Coraor1
    • Peter van Heusden1
    • Sandra Ng1
    • Sonal Henson1
    • Valentin Marcon1
    • Vivek Bhardwaj1
    • Show N_FILTERS more
    • Contributor
    • Mehmet Tekman
    • Khaled Jum'ah
    • Saskia Hiltemann514
    • Helena Rasche471
    • Björn Grüning379
    • Bérénice Batut232
    • Nicola Soranzo148
    • Martin Čech114
    • Anthony Bretaudeau101
    • Cristóbal Gallardo95
    • Niall Beard81
    • Wendi Bacon71
    • Nate Coraor62
    • Armin Dadras61
    • Gildas Le Corguillé57
    • Marius van den Beek55
    • William Durand55
    • Simon Gladman44
    • Teresa Müller43
    • Lucille Delisle42
    • Yvan Le Bras37
    • Pavankumar Videm36
    • Wolfgang Maier35
    • Melanie Föll34
    • Beatriz Serrano-Solano32
    • Simon Bray28
    • Subina Mehta27
    • Anup Kumar25
    • Donny Vrins23
    • Maria Doyle23
    • Peter van Heusden23
    • Anne Fouilloux20
    • Julia Jakiela20
    • Bazante Sanders19
    • Anton Nekrutenko17
    • Deepti Varshney16
    • Mélanie Petera14
    • Pratik Jagtap13
    • Timothy J. Griffin13
    • Marie Josse12
    • Matthias Bernt12
    • Pablo Moreno12
    • David López11
    • Delphine Lariviere11
    • Gianmauro Cuccuru11
    • Marisa Loach11
    • Mira Kuntz11
    • Paul Zierep11
    • Stéphanie Robin11
    • Katarzyna Kamieniecka10
    • Alexandre Cormier8
    • Dave Clements8
    • John Chilton8
    • Leonid Kostrykin8
    • Mallory Freeberg8
    • Melissa Burke8
    • Verena Moosmann8
    • Daniel Sobral7
    • Hans-Rudolf Hotz7
    • Kaivan Kamali7
    • Morgan Howells7
    • Sabine Österle7
    • Anna Syme6
    • Bert Droesbeke6
    • Christopher Barnett6
    • Clemens Blank6
    • Eija Korpelainen6
    • Ekaterina Polkh6
    • Enis Afgan6
    • Florian Christoph Sigloch6
    • Florian Heyl6
    • Linelle Abueg6
    • Tomas Klingström6
    • Alex Ostrovsky5
    • Alireza Khanteymoori5
    • Clea Siguret5
    • John Davis5
    • Lieven Clement5
    • Wandrille Duchemin5
    • olisand5
    • Catherine Bromhead4
    • Coline Royaux4
    • Dave B.4
    • David Philip Judge4
    • Diana Chiang Jurado4
    • Eli Chadwick4
    • Fotis E. Psomopoulos4
    • Hélène Chiapello4
    • Laura Leroi4
    • Mateusz Kuzak4
    • Phil Reed4
    • Roland Krause4
    • Romane LIBOUBAN4
    • Solenne Correard4
    • Amirhossein Naghsh Nilchi3
    • Andrea Bagnacani3
    • Daniel Faria3
    • Daniel Neves3
    • Daniela Schneider3
    • Engy Nasr3
    • Show N_FILTERS more
    • Resource type
    • e-learning53
    • slides7
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets50
    • Associated Workflows33
    • Quarto/RMarkdown Notebook22
    • Jupyter Notebook (with Solutions)3
    • Jupyter Notebook (without Solutions)3
    • ENA1
    • FAIR1
    • cyoa1
    • Show N_FILTERS more
  • Show disabled materials
  • Show archived materials
    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month

Training materials

  • Subscribe via email

Email Subscription

Register training material

Contributors: Mehmet Tekman or Khaled Jum'ah

60 materials found
  • e-learning

    Introduction to Data Management Plan (DMP) for Peatland Research and PeatDataHub

    • beginner
    FAIR Data, Workflows, and Research data management plan fair open
  • e-learning

    Converting between common single cell data formats

    • beginner
    Single Cell data import data management
  • e-learning

    Bulk matrix to ESet | Creating the bulk RNA-seq dataset for deconvolution

    • beginner
    Single Cell data management transcriptomics
  • e-learning

    Converting NCBI Data to the AnnData Format

    • beginner
    Single Cell data import data management
  • e-learning

    Matrix Exchange Format to ESet | Creating a single-cell RNA-seq reference dataset for deconvolution

    • beginner
    Single Cell data management
  • e-learning

    Importing files from public atlases

    • beginner
    Single Cell data import data management
  • e-learning

    Persistent Identifiers

    • beginner
    FAIR Data, Workflows, and Research data stewardship dmp fair
  • e-learning

    FAIRification of an RNAseq dataset

    • beginner
    FAIR Data, Workflows, and Research data stewardship dmp fair
  • e-learning

    FAIR and its Origins

    • beginner
    FAIR Data, Workflows, and Research data stewardship dmp fair
  • e-learning

    Metadata

    • beginner
    FAIR Data, Workflows, and Research data stewardship dmp fair
  • 1
  • 2
  • 3
  • 4
  • 5
  • 6
Training eSupport System
contact@example.com
Contribute
About TeSS
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.0
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.