Materials - TeSS Sandbox (Training eSupport System)

Training materials

Register training material

Contributors: Miaomiao Zhou or Alex Ostrovsky

8 materials found

e-learning

Identification of AMR genes in an assembled bacterial genome

• beginner
Genomics Whole genome sequencing Public health and epidemiology Microbiology Sequence analysis Infectious disease Antimicrobial resistance Genome Annotation amr gmod …
e-learning

Genome Assembly of MRSA from Oxford Nanopore MinION data (and optionally Illumina data)

• beginner
Sequence assembly Whole genome sequencing Public health and epidemiology Genomics Microbiology Antimicrobial resistance Assembly amr assembly microgalaxy …
e-learning

Genome Assembly of a bacterial genome (MRSA) sequenced using Illumina MiSeq Data

• beginner
Sequence assembly Whole genome sequencing Public health and epidemiology Genomics Microbiology Assembly assembly illumina microgalaxy
e-learning

Calling variants in non-diploid systems

• beginner
Genetic variation Genomics Sequence assembly DNA polymorphism Microbiology Sequence analysis Variant Analysis microgalaxy prokaryote
e-learning

Creating Galaxy tools from Conda Through Deployment

• beginner
Software engineering Development in Galaxy
slides

Tool Dependencies and Conda

• beginner
Software engineering Development in Galaxy
slides

Tool Dependencies and Containers

• beginner
Software engineering Development in Galaxy
e-learning

Galaxy Basics for everyone

• beginner
Introduction to Galaxy Analyses