Training materials
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e-learning
Collaboration with JupyterGIS
• beginnerClimate -
e-learning
Metabarcoding/eDNA through Obitools
• beginnerEcology Community composition EBV class EBV dataset EBV workflow Genetic composition EBV class Metabarcoding biodiversity eDNA -
e-learning
RNA Seq Counts to Viz in R
• beginnerTranscriptomics interactive-tools -
e-learning
JupyterLab in Galaxy
• beginnerUsing Galaxy and Managing your Data interactive-tools -
e-learning
Visualize Climate data with Panoply netCDF viewer
• beginnerClimate interactive-tools -
e-learning
Pangeo Notebook in Galaxy - Introduction to Xarray
• beginnerClimate interactive-tools jupyter-notebook pangeo -
e-learning
Pangeo ecosystem 101 for everyone - Introduction to Xarray Galaxy Tools
• beginnerClimate pangeo -
e-learning
Functionally Assembled Terrestrial Ecosystem Simulator (FATES) with Galaxy Climate JupyterLab
• beginnerClimate interactive-tools -
e-learning
Identification of AMR genes in an assembled bacterial genome
• beginnerGenomics Whole genome sequencing Public health and epidemiology Microbiology Sequence analysis Infectious disease Antimicrobial resistance Genome Annotation amr gmod … -
e-learning
Genome Assembly of MRSA from Oxford Nanopore MinION data (and optionally Illumina data)
• beginnerSequence assembly Whole genome sequencing Public health and epidemiology Genomics Microbiology Antimicrobial resistance Assembly amr assembly microgalaxy …