Training materials
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e-learning
Identification of AMR genes in an assembled bacterial genome
• beginnerGenomics Whole genome sequencing Public health and epidemiology Microbiology Sequence analysis Infectious disease Antimicrobial resistance Genome Annotation amr gmod … -
e-learning
Genome Assembly of MRSA from Oxford Nanopore MinION data (and optionally Illumina data)
• beginnerSequence assembly Whole genome sequencing Public health and epidemiology Genomics Microbiology Antimicrobial resistance Assembly amr assembly microgalaxy … -
e-learning
Genome Assembly of a bacterial genome (MRSA) sequenced using Illumina MiSeq Data
• beginnerSequence assembly Whole genome sequencing Public health and epidemiology Genomics Microbiology Assembly assembly illumina microgalaxy -
e-learning
Managing Galaxy on Kubernetes
•• intermediateGalaxy Server administration kubernetes -
e-learning
Galaxy Installation on Kubernetes
•• intermediateGalaxy Server administration kubernetes -
e-learning
Mapping Jobs to Destinations using TPV
• beginnerGalaxy Server administration git-gat jobs -
e-learning
Unicycler Assembly
• beginnerSequence assembly Genomics Microbiology Assembly biodiversity microgalaxy prokaryote -
e-learning
Running Jobs on Remote Resources with Pulsar
• beginnerGalaxy Server administration ansible git-gat jobs -
e-learning
Deep Learning (Part 2) - Recurrent neural networks (RNN)
• beginnerStatistics and probability Statistics and machine learning