Training materials
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e-learning
A Docker-based interactive Jupyterlab powered by GPU for artificial intelligence in Galaxy
• beginnerStatistics and probability Statistics and machine learning deep-learning image-segmentation interactive-tools jupyter-lab machine-learning protein-3D-structure -
e-learning
Identification of AMR genes in an assembled bacterial genome
• beginnerGenomics Whole genome sequencing Public health and epidemiology Microbiology Sequence analysis Infectious disease Antimicrobial resistance Genome Annotation amr gmod … -
e-learning
Genome Assembly of MRSA from Oxford Nanopore MinION data (and optionally Illumina data)
• beginnerSequence assembly Whole genome sequencing Public health and epidemiology Genomics Microbiology Antimicrobial resistance Assembly amr assembly microgalaxy … -
e-learning
Genome Assembly of a bacterial genome (MRSA) sequenced using Illumina MiSeq Data
• beginnerSequence assembly Whole genome sequencing Public health and epidemiology Genomics Microbiology Assembly assembly illumina microgalaxy -
slides
Recurrent neural networks (RNN) Deep Learning - Part 2
• beginnerStatistics and probability Statistics and machine learning -
slides
Feedforward neural networks (FNN) Deep Learning - Part 1
• beginnerStatistics and probability Statistics and machine learning -
e-learning
Deep Learning (Part 1) - Feedforward neural networks (FNN)
• beginnerStatistics and probability Statistics and machine learning -
e-learning
Deep Learning (Part 2) - Recurrent neural networks (RNN)
• beginnerStatistics and probability Statistics and machine learning -
e-learning
Deep Learning (Part 3) - Convolutional neural networks (CNN)
• beginnerStatistics and probability Statistics and machine learning -
e-learning
Image classification in Galaxy with fruit 360 dataset
• beginnerStatistics and probability Statistics and machine learning