Training materials
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e-learning
Inferring single cell trajectories with Monocle3
• beginnerMIGHTS Single Cell paper-replication -
e-learning
Filter, plot, and explore single cell RNA-seq data with Seurat (R)
• beginnerMIGHTS Single Cell jupyter-notebook paper-replication rmarkdown-notebook -
e-learning
Analysis of plant scRNA-Seq Data with Scanpy
• beginnerSingle Cell paper-replication plants -
e-learning
Comparing inferred cell compositions using MuSiC deconvolution
• beginnerSingle Cell transcriptomics -
e-learning
FAIR Galaxy Training Material
• beginnerFAIR Data, Workflows, and Research fair gtn training -
e-learning
Understanding Barcodes
• beginnerSingle Cell -
e-learning
Pre-processing of Single-Cell RNA Data
• beginnerSingle Cell work-in-progress -
e-learning
Scanpy Parameter Iterator
• beginnerSingle Cell -
slides
Plates, Batches, and Barcodes
• beginnerSingle Cell -
e-learning
Clustering 3K PBMCs with Scanpy
• beginner10x Single Cell