Please note: This instance is for testing/development, and any content submitted may be changed or deleted without warning.
Training eSupport System
  • Log In
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Trainers
    • Providers
    • Nodes

TeSS makes use of some necessary cookies to provide its core functionality.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Scientific topic
    • Bayesian methods11
    • Biostatistics11
    • Descriptive statistics11
    • Gaussian processes11
    • Inferential statistics11
    • Markov processes11
    • Multivariate statistics11
    • Probabilistic graphical model11
    • Probability11
    • Statistics11
    • Statistics and probability11
    • Bottom-up proteomics8
    • Discovery proteomics8
    • MS-based targeted proteomics8
    • MS-based untargeted proteomics8
    • Metaproteomics8
    • Peptide identification8
    • Protein and peptide identification8
    • Proteomics8
    • Quantitative proteomics8
    • Targeted proteomics8
    • Top-down proteomics8
    • Algorithms4
    • Computer programming4
    • Data structures4
    • Programming languages4
    • Software development4
    • Software engineering4
    • Comparative transcriptomics3
    • Epigenomics3
    • Transcriptome3
    • Transcriptomics3
    • ChIP-exo1
    • ChIP-seq1
    • ChIP-sequencing1
    • Chip Seq1
    • Chip sequencing1
    • Chip-sequencing1
    • Computational chemistry1
    • Content management1
    • DNA variation1
    • Data management1
    • Database management1
    • Diffraction experiment1
    • Document management1
    • File management1
    • Genetic variation1
    • Genomic variation1
    • Imaging1
    • Informatics1
    • Information management1
    • Information science1
    • Knowledge management1
    • Metadata management1
    • Microscopy1
    • Microscopy imaging1
    • Mutation1
    • Optical super resolution microscopy1
    • Photonic force microscopy1
    • Photonic microscopy1
    • Polymorphism1
    • Record management1
    • Research data management (RDM)1
    • Somatic mutations1
    • Show N_FILTERS more
    • Tool
    • Galaxy35
    • scikit-learn8
    • SAMtools7
    • BWA4
    • BEDTools3
    • DeepTools3
    • MultiQC3
    • BCFtools2
    • FastQC2
    • GEMINI2
    • STAR2
    • Trimmomatic2
    • AmberTools1
    • Bio3D1
    • Bowtie 21
    • Bwa-mem21
    • Cardinal1
    • Cutadapt1
    • DESeq21
    • Falco1
    • FeatureCounts1
    • FreeBayes1
    • GOEnrichment1
    • GOseq1
    • Gromacs1
    • JBrowse 21
    • MACS1
    • MDAnalysis1
    • OMERO1
    • Open Babel1
    • R1
    • RSeQC1
    • SCANPY1
    • SRA Software Toolkit1
    • The Protein Data Bank (PDB)1
    • Trim Galore1
    • UCSC Genome Browser Utilities1
    • UniProt1
    • WoLF PSORT1
    • bx-python1
    • compute_sequence_length1
    • fastp1
    • g:Profiler1
    • ggplot21
    • lofreq1
    • msConvert1
    • pathview1
    • pyGenomeTracks1
    • snpEff1
    • Show N_FILTERS more
    • Content provider
    • Galaxy Training61
    • Show N_FILTERS more
    • Keyword
    • Galaxy Server administration11
    • Statistics and machine learning11
    • Proteomics8
    • ansible7
    • git-gat7
    • DDA5
    • Using Galaxy and Managing your Data5
    • Contributing to the Galaxy Training Material4
    • interactive-tools4
    • ChIP-seq3
    • Development in Galaxy3
    • Epigenetics3
    • Introduction to Galaxy Analyses3
    • Single Cell3
    • Transcriptomics3
    • jobs3
    • work-in-progress3
    • FAIR Data, Workflows, and Research2
    • HeLa2
    • deep-learning2
    • jupyter-lab2
    • jupyter-notebook2
    • machine-learning2
    • ro-crate2
    • storage2
    • workflows2
    • 10x1
    • Choose your own Adventure1
    • CodeSpaces1
    • Command-line1
    • Computational chemistry1
    • FAIR Data1
    • GO enrichment1
    • GitPod1
    • Imaging1
    • QC1
    • SILAC1
    • Teaching and Hosting Galaxy training1
    • Variant Analysis1
    • Workflows1
    • and Research1
    • broken1
    • bulk1
    • collections1
    • covid191
    • cyoa1
    • dephosphorylation-site-prediction1
    • deploying1
    • drosophila1
    • epigenetics1
    • fine-tuning1
    • human1
    • image-segmentation1
    • imaging1
    • monitoring1
    • mouse1
    • protein-3D-structure1
    • rna-seq1
    • single cell1
    • single-cell1
    • variant-analysis1
    • Show N_FILTERS more
    • Difficulty level
    • Beginner54
    • Intermediate4
    • Advanced3
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International61
    • Show N_FILTERS more
    • Target audience
    • Students42
    • Galaxy Administrators14
    • Instructors5
    • Show N_FILTERS more
    • Author
    • Björn Grüning21
    • Bérénice Batut14
    • Anup Kumar11
    • Helena Rasche11
    • Anika Erxleben7
    • Florian Christoph Sigloch7
    • Nate Coraor6
    • Saskia Hiltemann6
    • Alireza Khanteymoori4
    • Clemens Blank4
    • Simon Bray4
    • Simon Gladman4
    • Anton Nekrutenko3
    • Laila Los3
    • Marius van den Beek3
    • Mira Kuntz3
    • Nicola Soranzo3
    • Vivek Bhardwaj3
    • Wolfgang Maier3
    • Anne Pajon2
    • Daniel Blankenberg2
    • Fidel Ramirez2
    • Friederike Dündar2
    • Mallory Freeberg2
    • Maria Doyle2
    • Martin Čech2
    • Mo Heydarian2
    • Pavankumar Videm2
    • Simone Leo2
    • Łukasz Opioła2
    • Abdulrahman Azab1
    • Anthony Bretaudeau1
    • Aysam Guerler1
    • Bartosz Walkowicz1
    • Bruno P. Kinoshita1
    • Christopher Barnett1
    • Dannon Baker1
    • Dave Clements1
    • Dilmurat Yusuf1
    • Ekaterina Polkh1
    • Eli Chadwick1
    • Fotis E. Psomopoulos1
    • Gianmauro Cuccuru1
    • Hans-Rudolf Hotz1
    • Joachim Wolff1
    • José Manuel Domínguez1
    • Leily Rabbani1
    • Lucille Delisle1
    • Markus Wolfien1
    • Matthias Bernt1
    • Matthias Fahrner1
    • Mehmet Tekman1
    • Melanie Föll1
    • Menna Gamal1
    • Peter Sefton1
    • Peter van Heusden1
    • Riccardo Massei1
    • Sarah Peter1
    • Stian Soiland-Reyes1
    • Tharindu Senapathi1
    • Timon Schlegel1
    • Toby Hodges1
    • Torfinn Nome1
    • Torsten Houwaart1
    • Youri Hoogstrate1
    • Show N_FILTERS more
    • Contributor
    • Armin Dadras
    • Saskia Hiltemann514
    • Helena Rasche471
    • Björn Grüning379
    • Bérénice Batut232
    • Nicola Soranzo148
    • Martin Čech114
    • Anthony Bretaudeau101
    • Cristóbal Gallardo95
    • Niall Beard81
    • Wendi Bacon71
    • Nate Coraor62
    • Gildas Le Corguillé57
    • Marius van den Beek55
    • William Durand55
    • Mehmet Tekman44
    • Simon Gladman44
    • Teresa Müller43
    • Lucille Delisle42
    • Yvan Le Bras37
    • Pavankumar Videm36
    • Wolfgang Maier35
    • Melanie Föll34
    • Beatriz Serrano-Solano32
    • Simon Bray28
    • Subina Mehta27
    • Anup Kumar25
    • Donny Vrins23
    • Maria Doyle23
    • Peter van Heusden23
    • Anne Fouilloux20
    • Julia Jakiela20
    • Bazante Sanders19
    • Anton Nekrutenko17
    • Deepti Varshney16
    • Khaled Jum'ah16
    • Mélanie Petera14
    • Pratik Jagtap13
    • Timothy J. Griffin13
    • Marie Josse12
    • Matthias Bernt12
    • Pablo Moreno12
    • David López11
    • Delphine Lariviere11
    • Gianmauro Cuccuru11
    • Marisa Loach11
    • Mira Kuntz11
    • Paul Zierep11
    • Stéphanie Robin11
    • Katarzyna Kamieniecka10
    • Alexandre Cormier8
    • Dave Clements8
    • John Chilton8
    • Leonid Kostrykin8
    • Mallory Freeberg8
    • Melissa Burke8
    • Verena Moosmann8
    • Daniel Sobral7
    • Hans-Rudolf Hotz7
    • Kaivan Kamali7
    • Morgan Howells7
    • Sabine Österle7
    • Anna Syme6
    • Bert Droesbeke6
    • Christopher Barnett6
    • Clemens Blank6
    • Eija Korpelainen6
    • Ekaterina Polkh6
    • Enis Afgan6
    • Florian Christoph Sigloch6
    • Florian Heyl6
    • Linelle Abueg6
    • Tomas Klingström6
    • Alex Ostrovsky5
    • Alireza Khanteymoori5
    • Clea Siguret5
    • John Davis5
    • Lieven Clement5
    • Wandrille Duchemin5
    • olisand5
    • Catherine Bromhead4
    • Coline Royaux4
    • Dave B.4
    • David Philip Judge4
    • Diana Chiang Jurado4
    • Eli Chadwick4
    • Fotis E. Psomopoulos4
    • Hélène Chiapello4
    • Laura Leroi4
    • Mateusz Kuzak4
    • Phil Reed4
    • Roland Krause4
    • Romane LIBOUBAN4
    • Solenne Correard4
    • Amirhossein Naghsh Nilchi3
    • Andrea Bagnacani3
    • Daniel Faria3
    • Daniel Neves3
    • Daniela Schneider3
    • Engy Nasr3
    • Show N_FILTERS more
    • Resource type
    • e-learning57
    • slides4
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets37
    • Associated Workflows30
    • Quarto/RMarkdown Notebook20
    • ansible7
    • git-gat7
    • jobs3
    • Jupyter Notebook (with Solutions)2
    • Jupyter Notebook (without Solutions)2
    • DDA1
    • broken1
    • deploying1
    • features1
    • interactive-tools1
    • monitoring1
    • Show N_FILTERS more
  • Show disabled materials
  • Show archived materials
    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month

Training materials

  • Subscribe via email

Email Subscription

Register training material

Contributors: Armin Dadras

61 materials found
  • e-learning

    Exporting to Onedata remote

    • beginner
    Using Galaxy and Managing your Data storage
  • e-learning

    Setting up a dev Onedata instance

    • beginner
    Software engineering Development in Galaxy storage
  • slides

    Fine-tuning Protein Language Model

    • beginner
    Statistics and probability Statistics and machine learning
  • slides

    Introduction to Machine learning

    • beginner
    Statistics and probability Statistics and machine learning
  • e-learning

    Preview the GTN website as you edit your training material

    • beginner
    Choose your own Adventure CodeSpaces Command-line Contributing to the Galaxy Training Material GitPod
  • e-learning

    Overview of the Galaxy OMERO-suite - Upload images and metadata in OMERO using Galaxy

    •• intermediate
    Imaging
  • e-learning

    GO Enrichment Analysis on Single-Cell RNA-Seq Data

    • beginner
    GO enrichment Single Cell single cell
  • e-learning

    Single-cell ATAC-seq standard processing with SnapATAC2

    •• intermediate
    10x Single Cell epigenetics single-cell
  • e-learning

    Automating Galaxy workflows using the command line

    • beginner
    Using Galaxy and Managing your Data covid19 variant-analysis workflows
  • e-learning

    Creating high resolution images of Galaxy Workflows

    • beginner
    Using Galaxy and Managing your Data workflows
  • 1
  • 2
  • 3
  • 4
  • 5
  • 6
  • 7
Training eSupport System
contact@example.com
Contribute
About TeSS
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.0
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.