Training materials
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e-learning
Genome annotation with Helixer
•• intermediateGenome Annotation eukaryota helixer jbrowse1 -
e-learning
CRISPR screen analysis
• beginnerCRISPR Genome Annotation cell line essential genes genome editing -
e-learning
Essential genes detection with Transposon insertion sequencing
• beginnerGenomics Microbiology Sequence analysis Mobile genetic elements Genome Annotation bacteria essential genes microgalaxy tnseq -
e-learning
Functional annotation of protein sequences
• beginnerGenome Annotation eukaryote -
e-learning
Refining Genome Annotations with Apollo (prokaryotes)
•• intermediateGenomics Microbiology Gene and protein families Sequence analysis Genome Annotation apollo2 gmod jbrowse1 microgalaxy prokaryote -
e-learning
Masking repeats with RepeatMasker
• beginnerGenome Annotation eukaryote -
e-learning
Genome annotation with Maker (short)
•• intermediateGenome Annotation eukaryote gmod jbrowse1 maker -
e-learning
Long non-coding RNAs (lncRNAs) annotation with FEELnc
•• intermediateGenome Annotation eukaryote -
e-learning
Genome annotation with Funannotate
•• intermediateGenome Annotation eukaryote gmod jbrowse1 -
e-learning
Identification of AMR genes in an assembled bacterial genome
• beginnerWhole genome sequencing Public health and epidemiology Genomics Microbiology Sequence analysis Infectious disease Antimicrobial resistance Genome Annotation amr gmod …
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