Please note: This instance is for testing/development, and any content submitted may be changed or deleted without warning.
Training eSupport System
  • Log In
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Trainers
    • Providers
    • Nodes

TeSS makes use of some necessary cookies to provide its core functionality.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Scientific topic
    • Exomes2
    • Genome annotation2
    • Genomes2
    • Genomics2
    • Personal genomics2
    • Synthetic genomics2
    • Viral genomics2
    • Whole genomes2
    • Antimicrobial stewardship1
    • Assembly1
    • Communicable disease1
    • DNA variation1
    • Epidemiology1
    • Gene and protein families1
    • Gene families1
    • Gene family1
    • Gene system1
    • Genes, gene family or system1
    • Genetic variation1
    • Genomic variation1
    • Infectious disease1
    • Medical microbiology1
    • Microbial genetics1
    • Microbial physiology1
    • Microbial surveillance1
    • Microbiological surveillance1
    • Microbiology1
    • Molecular infection biology1
    • Molecular microbiology1
    • Mutation1
    • Polymorphism1
    • Protein families1
    • Protein sequence classification1
    • Public health1
    • Public health and epidemiology1
    • Sequence assembly1
    • Somatic mutations1
    • Transmissible disease1
    • Show N_FILTERS more
    • Tool
    • JBrowse
    • Galaxy38
    • FastQC13
    • QUAST8
    • fastp8
    • MultiQC7
    • BEDTools6
    • BUSCO6
    • Bandage5
    • Flye5
    • NanoPlot5
    • SAMtools5
    • kraken25
    • Minimap24
    • STAR4
    • taxonomy_krona_chart4
    • Bwa-mem23
    • Cutadapt3
    • GenomeScope 2.03
    • KrakenTools3
    • Merqury3
    • BCFtools2
    • BLAST2
    • BWA2
    • Biopython2
    • Diamond2
    • Falco2
    • MACS2
    • Medaka2
    • RSeQC2
    • gfastats2
    • ggplot22
    • pyGenomeTracks2
    • ABRicate1
    • BamTools1
    • Bowtie 21
    • Bracken1
    • COMBAT-TB Workbench1
    • CellProfiler1
    • Clair31
    • Clustal 1.8 (Clustal W, Clustal X)1
    • Clustal 2 (Clustal W, Clustal X)1
    • DESeq21
    • DeepTools1
    • DropletUtils1
    • FASTQE1
    • FASTX-Toolkit1
    • FastTree1
    • FeatureCounts1
    • Filtlong1
    • GAEVAL1
    • GECKO1
    • GEMINI1
    • GOseq1
    • Galactic Circos1
    • Heinz1
    • InterProScan (EBI)1
    • IsoformSwitchAnalyzeR1
    • JBrowse 21
    • Jvarkit1
    • MLST1
    • MetaPhlAn1
    • Newick Utilities1
    • OBITools1
    • PfamScan1
    • Polypolish1
    • QualiMap1
    • R1
    • RED1
    • Racon1
    • RepeatMasker1
    • RepeatModeler1
    • SALSA1
    • SCANPY1
    • Salmon1
    • Smudgeplots1
    • StringTie1
    • Targetfinder.org1
    • Trim Galore1
    • UCSC Genome Browser Utilities1
    • Workflow4Metabolomics1
    • bx-python1
    • eggNOG-mapper v21
    • epiScanpy1
    • funannotate1
    • gffcompare1
    • gffread1
    • miRDeep21
    • pathview1
    • pilon1
    • purge_dups1
    • pycoQC1
    • rnaQUAST1
    • shovill1
    • snippy1
    • tb-profiler1
    • xcms1
    • Show N_FILTERS more
    • Content provider
    • Galaxy Training2
    • Show N_FILTERS more
    • Keyword
    • Genome Annotation1
    • Variant Analysis1
    • biodiversity1
    • eukaryote1
    • gmod1
    • jbrowse11
    • microgalaxy1
    • one-health1
    • prokaryote1
    • tuberculosis1
    • Show N_FILTERS more
    • Difficulty level
    • Intermediate2
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International2
    • Show N_FILTERS more
    • Target audience
    • Students2
    • Show N_FILTERS more
    • Author
    • Anthony Bretaudeau1
    • Peter van Heusden1
    • Simon Gladman1
    • Thoba Lose1
    • Show N_FILTERS more
    • Contributor
    • Cristóbal Gallardo
    • Bérénice Batut11
    • Anthony Bretaudeau10
    • Björn Grüning10
    • Helena Rasche10
    • Saskia Hiltemann10
    • Nicola Soranzo3
    • Deepti Varshney2
    • Maria Doyle2
    • Niall Beard2
    • Simon Bray2
    • Stéphanie Robin2
    • Teresa Müller2
    • Alexandre Cormier1
    • Anna Syme1
    • Bazante Sanders1
    • Ekaterina Polkh1
    • Erwan Corre1
    • Felicitas Kindel1
    • Gildas Le Corguillé1
    • Jasper Ouwerkerk1
    • Jonathan Kreplak1
    • Laura Leroi1
    • Linelle Abueg1
    • Mehmet Tekman1
    • Miaomiao Zhou1
    • Mélanie Petera1
    • Paul Zierep1
    • Peter van Heusden1
    • Romane LIBOUBAN1
    • Simon Gladman1
    • William Durand1
    • Wolfgang Maier1
    • pimarin1
    • Show N_FILTERS more
    • Resource type
    • e-learning
    • slides1
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets2
    • Associated Workflows2
    • Show N_FILTERS more
  • Show disabled materials
  • Show archived materials
    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month

e-Learning

  • Subscribe via email

Email Subscription

Register training material

Tools: JBrowse

and Contributors: Cristóbal Gallardo

and Resource type: e-learning

2 e-learning materials found
  • e-learning

    Genome annotation with Funannotate

    •• intermediate
    Genomics Gene and protein families Genome Annotation biodiversity eukaryote gmod jbrowse1
  • e-learning

    M. tuberculosis Variant Analysis

    •• intermediate
    Genetic variation Genomics Microbiology Sequence assembly Public health and epidemiology Infectious disease Variant Analysis microgalaxy one-health prokaryote …
Training eSupport System
contact@example.com
Contribute
About TeSS
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.0
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.