Training materials
Scientific topics: Public health and epidemiology
and Contributors: Deepti Varshney
and Tools: staramr
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Scientific topic
- Public health and epidemiology
- AMR1
- Antibiotic resistance (ABR)1
- Antifungal resistance1
- Antimicrobial resistance1
- Antimicrobial stewardship1
- Antiprotozoal resistance1
- Antiviral resistance1
- Biological sequences1
- Communicable disease1
- De novo genome sequencing1
- Epidemiology1
- Exomes1
- Extensive drug resistance (XDR)1
- Genome annotation1
- Genome sequencing1
- Genomes1
- Genomics1
- Infectious disease1
- Medical microbiology1
- Microbial genetics1
- Microbial physiology1
- Microbial surveillance1
- Microbiological surveillance1
- Microbiology1
- Molecular infection biology1
- Molecular microbiology1
- Multidrug resistance1
- Multiple drug resistance (MDR)1
- Multiresistance1
- Pandrug resistance (PDR)1
- Personal genomics1
- Public health1
- Sequence analysis1
- Sequence databases1
- Synthetic genomics1
- Total drug resistance (TDR)1
- Transmissible disease1
- Viral genomics1
- WGS1
- Whole genome resequencing1
- Whole genome sequencing1
- Whole genomes1
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Tool
- staramr
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- Bowtie 21
- Clair31
- Clustal 2 (Clustal W, Clustal X)1
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- Flye1
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- Minimap21
- MultiQC1
- NanoPlot1
- Newick Utilities1
- QUAST1
- SAMtools1
- ggplot21
- kraken21
- shovill1
- taxonomy_krona_chart1
- tbl2gff31
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- Galaxy Training1
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- Beginner1
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- e-learning1
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