Please note: This instance is for testing/development, and any content submitted may be changed or deleted without warning.
Training eSupport System
  • Log In
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Trainers
    • Providers
    • Nodes

TeSS makes use of some necessary cookies to provide its core functionality.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Scientific topic
    • Assembly
    • Sequence assembly3
    • Exomes2
    • Genome annotation2
    • Genomes2
    • Genomics2
    • Personal genomics2
    • Synthetic genomics2
    • Viral genomics2
    • Whole genomes2
    • 3C technologies1
    • 3C-based methods1
    • Antimicrobial stewardship1
    • Biodiversity1
    • Biological sequences1
    • Chromatin accessibility1
    • Chromatin accessibility assay1
    • Chromosome conformation analysis1
    • Chromosome conformation capture1
    • Communicable disease1
    • Community analysis1
    • Comparative transcriptomics1
    • DNA metabarcoding1
    • DNA variation1
    • Environmental metabarcoding1
    • Environmental microbiology1
    • Epidemiology1
    • Genetic variation1
    • Genomic variation1
    • Infectious disease1
    • Medical microbiology1
    • Metabarcoding1
    • Metagenomics1
    • Microbial ecology1
    • Microbial genetics1
    • Microbial physiology1
    • Microbial surveillance1
    • Microbiological surveillance1
    • Microbiology1
    • Microbiome1
    • Molecular community analysis1
    • Molecular infection biology1
    • Molecular microbiology1
    • Mutation1
    • Polymorphism1
    • Public health1
    • Public health and epidemiology1
    • RNA metabarcoding1
    • Sequence analysis1
    • Sequence databases1
    • Shotgun metagenomics1
    • Somatic mutations1
    • Taxonomy1
    • Transcriptome1
    • Transcriptomics1
    • Transmissible disease1
    • eDNA metabarcoding1
    • eRNA metabarcoding1
    • Show N_FILTERS more
    • Tool
    • Galaxy3
    • QUAST2
    • BCFtools1
    • BEDTools1
    • BUSCO1
    • Bwa-mem21
    • COMBAT-TB Workbench1
    • Cutadapt1
    • FastQC1
    • GenomeScope 2.01
    • JBrowse1
    • Jvarkit1
    • Merqury1
    • Minimap21
    • MultiQC1
    • QualiMap1
    • SALSA1
    • SAMtools1
    • fastp1
    • gfastats1
    • kraken21
    • purge_dups1
    • snippy1
    • tb-profiler1
    • Show N_FILTERS more
    • Content provider
    • Galaxy Training3
    • Show N_FILTERS more
    • Keyword
    • Assembly2
    • VGP2
    • biodiversity2
    • eukaryote2
    • pacbio2
    • Variant Analysis1
    • microgalaxy1
    • one-health1
    • prokaryote1
    • tuberculosis1
    • Show N_FILTERS more
    • Difficulty level
    • Intermediate3
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International3
    • Show N_FILTERS more
    • Target audience
    • Students3
    • Show N_FILTERS more
    • Author
    • Alex Ostrovsky2
    • Anton Nekrutenko2
    • Brandon Pickett2
    • Cristóbal Gallardo2
    • Delphine Lariviere2
    • Linelle Abueg2
    • Anna Syme1
    • Giulio Formenti1
    • Marcella Sozzoni1
    • Peter van Heusden1
    • Simon Gladman1
    • Thoba Lose1
    • Show N_FILTERS more
    • Contributor
    • Linelle Abueg
    • Saskia Hiltemann26
    • Bérénice Batut23
    • Helena Rasche22
    • Björn Grüning20
    • Cristóbal Gallardo14
    • Anthony Bretaudeau12
    • Deepti Varshney8
    • Niall Beard6
    • Nicola Soranzo6
    • Teresa Müller6
    • Anna Syme5
    • Anton Nekrutenko5
    • Delphine Lariviere5
    • Alexandre Cormier4
    • Maria Doyle4
    • Simon Gladman4
    • William Durand4
    • Wolfgang Maier4
    • Gildas Le Corguillé3
    • Solenne Correard3
    • Bazante Sanders2
    • Erwan Corre2
    • Laura Leroi2
    • Miaomiao Zhou2
    • Mélanie Petera2
    • Nate Coraor2
    • Peter van Heusden2
    • Stéphanie Robin2
    • Alex Ostrovsky1
    • Engy Nasr1
    • Enis Afgan1
    • Hans-Rudolf Hotz1
    • Jennifer Hillman-Jackson1
    • Marius van den Beek1
    • Matúš Kalaš1
    • Nikos Pechlivanis1
    • Paul Zierep1
    • Polina Polunina1
    • Romane LIBOUBAN1
    • Saim Momin1
    • Tom Brown1
    • Verena Moosmann1
    • Vijay1
    • pimarin1
    • Show N_FILTERS more
    • Resource type
    • e-learning3
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets3
    • Associated Workflows2
    • Show N_FILTERS more
  • Show disabled materials
  • Show archived materials
    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month

Training materials

  • Subscribe via email

Email Subscription

Register training material

Scientific topics: Assembly

and Contributors: Linelle Abueg

3 materials found
  • e-learning

    Using the VGP workflows to assemble a vertebrate genome with HiFi and Hi-C data

    •• intermediate
    Sequence assembly Chromosome conformation capture Assembly VGP biodiversity eukaryote pacbio
  • e-learning

    Vertebrate genome assembly using HiFi, Bionano and Hi-C data - Step by Step

    •• intermediate
    Sequence assembly Genomics Biodiversity Assembly VGP biodiversity eukaryote pacbio
  • e-learning

    M. tuberculosis Variant Analysis

    •• intermediate
    Genetic variation Genomics Microbiology Sequence assembly Public health and epidemiology Infectious disease Variant Analysis microgalaxy one-health prokaryote …
Training eSupport System
contact@example.com
Contribute
About TeSS
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.0
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.