Training materials
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e-learning
Label-free data analysis using MaxQuant
• beginnerProteomics DDA label-free -
e-learning
Calling variants in non-diploid systems
• beginnerGenetic variation Genomics Sequence assembly DNA polymorphism Microbiology Sequence analysis Variant Analysis microgalaxy prokaryote -
e-learning
From NCBI's Sequence Read Archive (SRA) to Galaxy: SARS-CoV-2 variant analysis
• beginnerGenetic variation Variant Analysis covid19 one-health virology -
e-learning
M. tuberculosis Variant Analysis
•• intermediateGenetic variation Genomics Microbiology Sequence assembly Public health and epidemiology Infectious disease Variant Analysis microgalaxy one-health prokaryote … -
e-learning
Reference-based RNAseq data analysis (long)
• beginnerTranscriptomics -
e-learning
Clustering in Machine Learning
• beginnerStatistics and probability Statistics and machine learning -
e-learning
Infinium Human Methylation BeadChip
• beginnerEpigenomics Epigenetics -
slides
Mass spectrometry: LC-MS preprocessing - advanced
• beginnerMetabolomics -
e-learning
Mass spectrometry: GC-MS data processing (with XCMS, RAMClustR, RIAssigner, and matchms)
•• intermediateMetabolomics -
e-learning
Mass spectrometry: LC-MS preprocessing with XCMS
•• intermediateMetabolomics
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