Please note: This instance is for testing/development, and any content submitted may be changed or deleted without warning.
Training eSupport System
  • Log In
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Trainers
    • Providers
    • Nodes

TeSS makes use of some necessary cookies to provide its core functionality.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Scientific topic
    • Transcriptomics
    • Algorithms12
    • Computer programming12
    • Data structures12
    • Programming languages12
    • Software development12
    • Software engineering12
    • Biological sequences9
    • Sequence analysis9
    • Sequence databases9
    • Bottom-up proteomics8
    • Discovery proteomics8
    • MS-based targeted proteomics8
    • MS-based untargeted proteomics8
    • Metaproteomics8
    • Peptide identification8
    • Protein and peptide identification8
    • Proteomics8
    • Quantitative proteomics8
    • Targeted proteomics8
    • Top-down proteomics8
    • Assembly6
    • Comparative transcriptomics6
    • DNA variation6
    • Exomes6
    • Genetic variation6
    • Genome annotation6
    • Genomes6
    • Genomic variation6
    • Genomics6
    • Mutation6
    • Personal genomics6
    • Polymorphism6
    • Sequence assembly6
    • Somatic mutations6
    • Synthetic genomics6
    • Transcriptome6
    • Viral genomics6
    • Whole genomes6
    • Antimicrobial stewardship5
    • Medical microbiology5
    • Microbial genetics5
    • Microbial physiology5
    • Microbial surveillance5
    • Microbiological surveillance5
    • Microbiology5
    • Molecular infection biology5
    • Molecular microbiology5
    • Epigenomics4
    • Computational ecology3
    • Ecoinformatics3
    • Ecological informatics3
    • Ecology3
    • Ecosystem science3
    • Taxonomy3
    • Community analysis2
    • DNA metabarcoding2
    • DNA polymorphism2
    • Environmental metabarcoding2
    • Environmental microbiology2
    • Metabarcoding2
    • Metagenomics2
    • Microbial ecology2
    • Microbiome2
    • Microsatellites2
    • Molecular community analysis2
    • RFLP2
    • RNA metabarcoding2
    • SNP2
    • Shotgun metagenomics2
    • Single nucleotide polymorphism2
    • VNTR2
    • Variable number of tandem repeat polymorphism2
    • eDNA metabarcoding2
    • eRNA metabarcoding2
    • snps2
    • Bayesian methods1
    • Biodiversity1
    • Biostatistics1
    • ChIP-exo1
    • ChIP-seq1
    • ChIP-sequencing1
    • Chip Seq1
    • Chip sequencing1
    • Chip-sequencing1
    • Descriptive statistics1
    • Gaussian processes1
    • Gene and protein families1
    • Gene families1
    • Gene family1
    • Gene system1
    • Genes, gene family or system1
    • Genetic linkage1
    • Inferential statistics1
    • Linkage1
    • Linkage mapping1
    • Mapping1
    • Markov processes1
    • Multivariate statistics1
    • Probabilistic graphical model1
    • Show N_FILTERS more
    • Tool
    • Galaxy4
    • BEDTools3
    • Cutadapt2
    • DeepTools2
    • HISAT22
    • SAMtools2
    • STAR2
    • DESeq21
    • Falco1
    • FastQC1
    • FeatureCounts1
    • GOseq1
    • MEME1
    • MultiQC1
    • Peakachu1
    • R1
    • RCAS1
    • RSeQC1
    • Salmon1
    • Trimmomatic1
    • UMI-tools1
    • ggplot21
    • pathview1
    • pyGenomeTracks1
    • Show N_FILTERS more
    • Content provider
    • Galaxy Training6
    • Show N_FILTERS more
    • Keyword
    • Transcriptomics6
    • QC1
    • bulk1
    • collections1
    • cyoa1
    • drosophila1
    • rna-seq1
    • Show N_FILTERS more
    • Difficulty level
    • Beginner6
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International6
    • Show N_FILTERS more
    • Target audience
    • Students6
    • Show N_FILTERS more
    • Author
    • Mallory Freeberg3
    • Bérénice Batut2
    • Mo Heydarian2
    • Andrea Bagnacani1
    • Anika Erxleben1
    • Anton Nekrutenko1
    • Clemens Blank1
    • Daniel Maticzka1
    • Florian Heyl1
    • Lucille Delisle1
    • Maria Doyle1
    • Nicola Soranzo1
    • Pavankumar Videm1
    • Peter van Heusden1
    • Show N_FILTERS more
    • Contributor
    • Niall Beard
    • Saskia Hiltemann26
    • Helena Rasche24
    • Björn Grüning20
    • Nicola Soranzo13
    • Bérénice Batut11
    • Cristóbal Gallardo8
    • Gildas Le Corguillé6
    • Lucille Delisle6
    • Maria Doyle6
    • Anthony Bretaudeau5
    • William Durand5
    • Martin Čech4
    • Pavankumar Videm4
    • Armin Dadras3
    • Mallory Freeberg3
    • Wolfgang Maier3
    • Xavier Garnier3
    • CicoZhang2
    • Marius van den Beek2
    • Mehmet Tekman2
    • Amirhossein Naghsh Nilchi1
    • Andrea Bagnacani1
    • Anika Erxleben1
    • Anne Fouilloux1
    • Beatriz Serrano-Solano1
    • Clea Siguret1
    • Clemens Blank1
    • Eija Korpelainen1
    • Ekaterina Polkh1
    • Florian Heyl1
    • Fotis E. Psomopoulos1
    • Graeme Tyson1
    • Hans-Rudolf Hotz1
    • IGC Bioinformatics Unit1
    • James Taylor1
    • José Manuel Domínguez1
    • Linelle Abueg1
    • Maria Lehtivaara1
    • Mateusz Kuzak1
    • Matti Hoch1
    • Mira Kuntz1
    • Mo Heydarian1
    • Mélanie Petera1
    • Nate Coraor1
    • Peter-Bram 't Hoen1
    • Sanjay Kumar Srikakulam1
    • Simon Bray1
    • Sofoklis Keisaris1
    • Teresa Müller1
    • The Carpentries1
    • Show N_FILTERS more
    • Resource type
    • e-learning6
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets6
    • Associated Workflows4
    • Quarto/RMarkdown Notebook1
    • Show N_FILTERS more
  • Show disabled materials
  • Show archived materials
    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month

Training materials

  • Subscribe via email

Email Subscription

Register training material

Scientific topics: Transcriptomics

and Contributors: Niall Beard

6 materials found
  • e-learning

    CLIP-Seq data analysis from pre-processing to motif detection

    • beginner
    Transcriptomics
  • e-learning

    Reference-based RNAseq data analysis (long)

    • beginner
    Transcriptomics
  • e-learning

    Differential abundance testing of small RNAs

    • beginner
    Transcriptomics
  • e-learning

    De novo transcriptome reconstruction with RNA-Seq

    • beginner
    Transcriptomics
  • e-learning

    Visualization of RNA-Seq results with CummeRbund

    • beginner
    Transcriptomics
  • e-learning

    Reference-based RNA-Seq data analysis

    • beginner
    Transcriptomics QC bulk collections cyoa drosophila rna-seq
Training eSupport System
contact@example.com
Contribute
About TeSS
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.0
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.