Please note: This instance is for testing/development, and any content submitted may be changed or deleted without warning.
Training eSupport System
  • Log In
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Trainers
    • Providers
    • Nodes

TeSS makes use of some necessary cookies to provide its core functionality.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Scientific topic
    • Algorithms16
    • Computer programming16
    • Data structures16
    • Programming languages16
    • Software development16
    • Software engineering16
    • Antimicrobial stewardship4
    • Exomes4
    • Genome annotation4
    • Genomes4
    • Genomics4
    • Medical microbiology4
    • Microbial genetics4
    • Microbial physiology4
    • Microbial surveillance4
    • Microbiological surveillance4
    • Microbiology4
    • Molecular infection biology4
    • Molecular microbiology4
    • Personal genomics4
    • Synthetic genomics4
    • Viral genomics4
    • Whole genomes4
    • Communicable disease3
    • Infectious disease3
    • Transmissible disease3
    • Assembly2
    • DNA polymorphism2
    • DNA variation2
    • Evolution2
    • Evolutionary biology2
    • Genetic variation2
    • Genomic variation2
    • Microsatellites2
    • Mutation2
    • Polymorphism2
    • RFLP2
    • SNP2
    • Sequence assembly2
    • Single nucleotide polymorphism2
    • Somatic mutations2
    • VNTR2
    • Variable number of tandem repeat polymorphism2
    • snps2
    • Biological sequences1
    • Content management1
    • Data management1
    • Database management1
    • Document management1
    • Epidemiology1
    • File management1
    • Informatics1
    • Information management1
    • Information science1
    • Knowledge management1
    • Metadata management1
    • Phylogenetic clocks1
    • Phylogenetic dating1
    • Phylogenetic simulation1
    • Phylogenetic stratigraphy1
    • Phylogeny1
    • Phylogeny reconstruction1
    • Public health1
    • Public health and epidemiology1
    • Record management1
    • Research data management (RDM)1
    • Sequence analysis1
    • Sequence databases1
    • Show N_FILTERS more
    • Tool
    • Galaxy8
    • snippy3
    • BCFtools2
    • COMBAT-TB Workbench2
    • SAMtools2
    • tb-profiler2
    • FastQC1
    • JBrowse1
    • Jvarkit1
    • MultiQC1
    • QualiMap1
    • RAxML1
    • RStudio1
    • Trimmomatic1
    • bx-python1
    • fastp1
    • kraken21
    • Show N_FILTERS more
    • Content provider
    • Galaxy Training23
    • Show N_FILTERS more
    • Keyword
    • Foundations of Data Science16
    • jupyter-notebook10
    • SQL4
    • microgalaxy4
    • prokaryote4
    • R3
    • one-health3
    • Evolution2
    • Variant Analysis2
    • Contributing to the Galaxy Training Material1
    • Galaxy Server administration1
    • Introduction to Galaxy Analyses1
    • Python1
    • ansible1
    • conda1
    • deploying1
    • git-gat1
    • gmod1
    • interactive-tools1
    • jbrowse11
    • phylogenetics1
    • rmarkdown-notebook1
    • tuberculosis1
    • Show N_FILTERS more
    • Difficulty level
    • Beginner11
    • Intermediate11
    • Advanced1
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International23
    • Show N_FILTERS more
    • Target audience
    • Students21
    • Galaxy Administrators1
    • Instructors1
    • Show N_FILTERS more
    • Author
    • Helena Rasche14
    • The Carpentries11
    • Avans Hogeschool4
    • Fotis E. Psomopoulos3
    • Simon Gladman3
    • Christoph Stritt2
    • Daniela Brites2
    • Galo A. Goig2
    • Sofoklis Keisaris2
    • Anna Syme1
    • Bazante Sanders1
    • Bérénice Batut1
    • Cristóbal Gallardo1
    • Dave Clements1
    • Donny Vrins1
    • Maria Christina Maniou1
    • Nate Coraor1
    • Peter van Heusden1
    • Saskia Hiltemann1
    • Thoba Lose1
    • Toby Hodges1
    • Torsten Seemann1
    • Show N_FILTERS more
    • Contributor
    • Peter van Heusden
    • Saskia Hiltemann514
    • Helena Rasche471
    • Björn Grüning379
    • Bérénice Batut232
    • Nicola Soranzo148
    • Martin Čech114
    • Anthony Bretaudeau101
    • Cristóbal Gallardo95
    • Niall Beard81
    • Wendi Bacon71
    • Nate Coraor62
    • Armin Dadras61
    • Gildas Le Corguillé57
    • Marius van den Beek55
    • William Durand55
    • Mehmet Tekman44
    • Simon Gladman44
    • Teresa Müller43
    • Lucille Delisle42
    • Yvan Le Bras37
    • Pavankumar Videm36
    • Wolfgang Maier35
    • Melanie Föll34
    • Beatriz Serrano-Solano32
    • Simon Bray28
    • Subina Mehta27
    • Anup Kumar25
    • Donny Vrins23
    • Maria Doyle23
    • Anne Fouilloux20
    • Julia Jakiela20
    • Bazante Sanders19
    • Anton Nekrutenko17
    • Deepti Varshney16
    • Khaled Jum'ah16
    • Mélanie Petera14
    • Pratik Jagtap13
    • Timothy J. Griffin13
    • Marie Josse12
    • Matthias Bernt12
    • Pablo Moreno12
    • David López11
    • Delphine Lariviere11
    • Gianmauro Cuccuru11
    • Marisa Loach11
    • Mira Kuntz11
    • Paul Zierep11
    • Stéphanie Robin11
    • Katarzyna Kamieniecka10
    • Alexandre Cormier8
    • Dave Clements8
    • John Chilton8
    • Leonid Kostrykin8
    • Mallory Freeberg8
    • Melissa Burke8
    • Verena Moosmann8
    • Daniel Sobral7
    • Hans-Rudolf Hotz7
    • Kaivan Kamali7
    • Morgan Howells7
    • Sabine Österle7
    • Anna Syme6
    • Bert Droesbeke6
    • Christopher Barnett6
    • Clemens Blank6
    • Eija Korpelainen6
    • Ekaterina Polkh6
    • Enis Afgan6
    • Florian Christoph Sigloch6
    • Florian Heyl6
    • Linelle Abueg6
    • Tomas Klingström6
    • Alex Ostrovsky5
    • Alireza Khanteymoori5
    • Clea Siguret5
    • John Davis5
    • Lieven Clement5
    • Wandrille Duchemin5
    • olisand5
    • Catherine Bromhead4
    • Coline Royaux4
    • Dave B.4
    • David Philip Judge4
    • Diana Chiang Jurado4
    • Eli Chadwick4
    • Fotis E. Psomopoulos4
    • Hélène Chiapello4
    • Laura Leroi4
    • Mateusz Kuzak4
    • Phil Reed4
    • Roland Krause4
    • Romane LIBOUBAN4
    • Solenne Correard4
    • Amirhossein Naghsh Nilchi3
    • Andrea Bagnacani3
    • Daniel Faria3
    • Daniel Neves3
    • Daniela Schneider3
    • Engy Nasr3
    • Show N_FILTERS more
    • Resource type
    • e-learning23
    • Show N_FILTERS more
    • Related resource
    • Jupyter Notebook (with Solutions)9
    • Jupyter Notebook (without Solutions)9
    • Quarto/RMarkdown Notebook6
    • Associated Training Datasets5
    • Associated Workflows5
    • ansible1
    • deploying1
    • git-gat1
    • Show N_FILTERS more
  • Show disabled materials
  • Show archived materials
    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month

Training materials

  • Subscribe via email

Email Subscription

Register training material

Contributors: Peter van Heusden

23 materials found
  • e-learning

    R basics in Galaxy

    • beginner
    Software engineering Foundations of Data Science R interactive-tools
  • e-learning

    Advanced R in Galaxy

    •• intermediate
    Software engineering Foundations of Data Science R
  • e-learning

    Plotting in Python

    •• intermediate
    Software engineering Foundations of Data Science jupyter-notebook
  • e-learning

    Virtual Environments For Software Development

    •• intermediate
    Software engineering Foundations of Data Science jupyter-notebook
  • e-learning

    Microbial Variant Calling

    • beginner
    Genetic variation Genomics Sequence assembly DNA polymorphism Microbiology Sequence analysis Variant Analysis gmod jbrowse1 microgalaxy …
  • e-learning

    M. tuberculosis Variant Analysis

    •• intermediate
    Genetic variation Genomics Microbiology Sequence assembly Public health and epidemiology Infectious disease Variant Analysis microgalaxy one-health prokaryote …
  • e-learning

    Teaching Python

    • beginner
    Contributing to the Galaxy Training Material
  • e-learning

    Version Control with Git

    • beginner
    Software engineering Foundations of Data Science
  • e-learning

    Basics of using Git from the Command Line

    • beginner
    Software engineering Foundations of Data Science
  • e-learning

    Variant Calling Workflow

    • beginner
    Software engineering Foundations of Data Science
  • 1
  • 2
  • 3
Training eSupport System
contact@example.com
Contribute
About TeSS
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.0
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.