Training materials
Contributors: Saskia Hiltemann
and Licence: Creative Commons Attribution 4.0 International
520 materials found
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e-learning
Tree thinking for tuberculosis evolution and epidemiology
• beginnerEvolutionary biology Genomics Microbiology Phylogeny Infectious disease Evolution microgalaxy one-health phylogenetics prokaryote -
e-learning
Identifying tuberculosis transmission links: from SNPs to transmission clusters
•• intermediateEvolutionary biology Genomics Microbiology Infectious disease DNA polymorphism Evolution microgalaxy one-health prokaryote -
e-learning
Analyse HeLa fluorescence siRNA screen
•• intermediateImaging HeLa -
e-learning
A Docker-based interactive Jupyterlab powered by GPU for artificial intelligence in Galaxy
• beginnerStatistics and probability Statistics and machine learning deep-learning image-segmentation interactive-tools jupyter-lab machine-learning protein-3D-structure -
e-learning
Visualization of Climate Data using NetCDF xarray Map Plotting
• beginnerEcology pangeo -
e-learning
Checking expected species and contamination in bacterial isolate
• beginnerEcology Whole genome sequencing Genomics Microbiology Microbial ecology bacteria illumina microgalaxy -
e-learning
Generating a single cell matrix using Alevin and combining datasets (bash + R)
• beginner10x MIGHTS Single Cell jupyter-notebook paper-replication -
e-learning
Filter, plot and explore single-cell RNA-seq data with Scanpy (Python)
• beginnerMIGHTS Single Cell jupyter-notebook paper-replication -
e-learning
Removing the effects of the cell cycle
• beginnerSingle Cell -
e-learning
Inferring single cell trajectories with Scanpy
• beginnerMIGHTS Single Cell paper-replication