Training materials
Tools: HISAT2
and Contributors: William Durand
and Licence: Creative Commons Attribution 4.0 International
2 materials found
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Scientific topic
- Comparative transcriptomics2
- Transcriptome2
- Transcriptomics2
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Tool
- HISAT2
- Galaxy29
- BWA6
- SAMtools6
- FastQC5
- BEDTools4
- Cutadapt3
- DeepTools3
- FreeBayes3
- Stacks3
- BamTools2
- JBrowse2
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- NanoPlot2
- Trimmomatic2
- Vcflib2
- lofreq2
- mothur2
- pycoQC2
- taxonomy_krona_chart2
- DESeq21
- FeatureCounts1
- GEMINI1
- GOseq1
- HUMAnN21
- Krona1
- MetaPhlAn1
- MethylDackel1
- Newick Utilities1
- QUAST1
- R1
- RSeQC1
- SPAdes1
- STAR1
- Salmon1
- UniProt1
- Unicycler1
- VelvetOptimiser1
- WoLF PSORT1
- bx-python1
- fastp1
- ggplot21
- pathview1
- pyGenomeTracks1
- snpEff1
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Content provider
- Galaxy Training2
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Keyword
- Transcriptomics2
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Difficulty level
- Beginner2
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Target audience
- Students2
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Contributor
- William Durand
- Björn Grüning5
- Helena Rasche5
- Saskia Hiltemann5
- Nicola Soranzo4
- Bérénice Batut3
- Gildas Le Corguillé3
- Anthony Bretaudeau2
- Mallory Freeberg2
- Niall Beard2
- James Johnson1
- James Taylor1
- José Manuel Domínguez1
- Linelle Abueg1
- Maria Doyle1
- Marius van den Beek1
- Matti Hoch1
- Mehmet Tekman1
- Melanie Föll1
- Mira Kuntz1
- Mo Heydarian1
- Sanjay Kumar Srikakulam1
- Subina Mehta1
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Resource type
- e-learning2
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