Training materials
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Video, Training materials, E-learning
Expanding the SPHN RDF Schema
• beginnerComputer science Data management FAIR data Medical informatics Ontology and terminology Data handling Visualisation Ontology visualisation Data editing Clinical data Data semantics FAIR Ontology editing Protegé RDF OWL -
Video, Training materials, E-learning
Training Primer (RDF and SPARQL)
• beginnerOntology and terminology Medical informatics FAIR data Data management Computer science Data retrieval Data handling Database search Query and retrieval Clinical data SPARQL Query data RDF Knowledge graph Triplestore Ontology -
Video, Training materials, E-learning
Semantic Standards
• beginnerComputer science Data management FAIR data Medical informatics Ontology and terminology Data handling Standardisation and normalisation Clinical data Data semantics FAIR Standards Ontology SNOMED CT LOINC ATC CHOP ICD -
Video, Training materials, Mock data, E-learning
RDF Schema and Data Visualization
• beginnerComputer science Data management FAIR data Medical informatics Data visualisation Query and retrieval Data handling Data retrieval Visualisation Ontology visualisation Clinical data SPARQL Data visualization RDF Knowledge graph GraphDB Mock data -
Video, Training materials with mock data, E-learning
Querying Data with SPARQL
• beginnerMedical informatics FAIR data Data management Computer science Data retrieval Data handling Database search Query and retrieval Clinical data SPARQL Query data RDF Knowledge graph SNOMED CT LOINC -
Training materials
Using bioinformatics to hunt SARS-CoV-2, its variants & its origins – a practical guide
• beginnerBioinformatics for schools, basic bioinformatics, SARS-CoV-2 pandemic, genome analysis, protein sequence analysis, protein structure analysis, virus variants, spike protein, training material -
Computer Software, workflow
How to use V-pipe (SARS-CoV-2 data)
• beginnerVirology Genetic variation Workflows Variant calling Alignment Read pre-processing coronavirus NGS bioinformatics Variant-calling -
Tutorial, Slideshow, e-learning
High Performance Computing (HPC) in Life Sciences
• beginnerComputer science Bioinformatics Biology High performance computing high-performance computing -
R Basics Quiz
• beginner -
BLAST and multiple sequence alignment (MSA) programs
• beginnerBlast E learning Multiple sequence alignment
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