Training materials
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e-learning
Pfam: Repeats in Pfam
Protein structure analysis Protein families Tandem repeats Profile Hidden Markov models HMMs
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e-learning
Pfam: Quick tour
Gene and protein families Protein families Multiple sequence alignments Profile Hidden Markov models HMMs
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e-learning
Protein classification: An introduction to EMBL-EBI resources
Proteins Gene and protein families Protein classification Protein families Protein domains Protein signatures
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e-learning
UniProt: Quick tour
Proteins Protein function Swiss-Prot UniProtKB TrEMBL
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e-learning
Functional genomics I: Introduction and designing experiments
Functional genomics Gene expression Genomics Introduction Gramene database Designing functional genomics experiments
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e-learning
Functional genomics II: Common technologies and data analysis methods
Functional genomics Gene expression RNA-Seq Microarray experiment Genotype and phenotype Next-generation sequencing NGS Real-time PCR Microarray Epigenetic modifications Histone modifications DNA-protein interaction RNA-protein interaction
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e-learning
Functional genomics III: Submitting your data and functional genomics databases
Functional genomics Data curation and archival Data management Metadata Functional genomics resources Data submission Microarray Next-generation sequencing NGS
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e-learning
Pfam: Creating protein families
Protein structure analysis Protein sites, features and motifs Multiple sequence alignments Profile Hidden Markov models HMMs Protein families
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e-learning
Ensembl: REST API
Genetics Genome sequencing Sequence alignments API Programmatic access Python R
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e-learning
MGnify: Quick tour
Metagenomics Metatranscriptomics Microbiology Small molecules Metabolites Metabolome