Please note: This instance is for testing/development, and any content submitted may be changed or deleted without warning.
Training eSupport System
  • Log In
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Trainers
    • Providers
    • Nodes

TeSS makes use of some necessary cookies to provide its core functionality.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Scientific topic
    • Comparative transcriptomics3
    • Transcriptome3
    • Transcriptomics3
    • Bottom-up proteomics2
    • Discovery proteomics2
    • MS-based targeted proteomics2
    • MS-based untargeted proteomics2
    • Metaproteomics2
    • Peptide identification2
    • Protein and peptide identification2
    • Proteomics2
    • Quantitative proteomics2
    • Targeted proteomics2
    • Top-down proteomics2
    • Show N_FILTERS more
    • Tool
    • HISAT2
    • Galaxy257
    • FastQC29
    • SAMtools21
    • MultiQC18
    • scikit-learn15
    • BEDTools14
    • BWA14
    • SCANPY13
    • Cutadapt12
    • Data Stewardship Wizard12
    • fastp12
    • BLAST11
    • DeepTools11
    • taxonomy_krona_chart9
    • Falco8
    • FreeBayes8
    • GEMINI8
    • FASTX-Toolkit7
    • NanoPlot7
    • STAR7
    • ggplot27
    • kraken27
    • BamTools6
    • Bandage6
    • Galaxy Image Analysis6
    • JBrowse6
    • QUAST6
    • Trimmomatic6
    • scikit-image6
    • Biopython5
    • Bowtie 25
    • MetaPhlAn5
    • MuSiC suite: PoPMuSiC, HoTMuSiC, and SNPMuSiC5
    • Chipster4
    • Diamond4
    • Flye4
    • HUMAnN24
    • KrakenTools4
    • MACS4
    • MaxQuant4
    • Minimap24
    • RStudio4
    • Workflow4Metabolomics4
    • anndata4
    • annotatemyids4
    • mothur4
    • snpEff4
    • BCFtools3
    • BUSCO3
    • Bracken3
    • Bwa-mem23
    • CellProfiler3
    • Clustal 1.8 (Clustal W, Clustal X)3
    • DropletUtils3
    • GOseq3
    • Galactic Circos3
    • GraPhlAn3
    • MAFFT3
    • MSstats3
    • Newick Utilities3
    • R3
    • RSeQC3
    • Salmon3
    • SeqCode3
    • SortMeRNA3
    • Stacks3
    • StringTie3
    • Trim Galore3
    • bx-python3
    • export2graphlan3
    • gffcompare3
    • humann3
    • msConvert3
    • seqtk3
    • xcms3
    • Bakta2
    • BridgeDbR2
    • Cardinal2
    • ChIPpeakAnno2
    • CheckM2
    • DESeq22
    • FASTQE2
    • FastTree2
    • GECKO2
    • GOEnrichment2
    • GenomeScope 2.02
    • Heinz2
    • InterMine2
    • InterMineR2
    • InterProScan (EBI)2
    • JBrowse 22
    • MAGeCK2
    • MEGAHIT2
    • MEME2
    • Medaka2
    • Merqury2
    • Ontology Lookup Service2
    • Open Babel2
    • Racon2
    • Show N_FILTERS more
    • Content provider
    • Galaxy Training5
    • Show N_FILTERS more
    • Keyword
    • Transcriptomics3
    • Proteomics2
    • label-free2
    • QC1
    • collections1
    • mouse1
    • Show N_FILTERS more
    • Difficulty level
    • Beginner
    • Intermediate2
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International5
    • Show N_FILTERS more
    • Target audience
    • Students5
    • Show N_FILTERS more
    • Author
    • James Johnson2
    • Katherine Do2
    • Mallory Freeberg2
    • Subina Mehta2
    • Belinda Phipson1
    • Harriet Dashnow1
    • Maria Doyle1
    • Mo Heydarian1
    • Show N_FILTERS more
    • Contributor
    • Björn Grüning3
    • Bérénice Batut3
    • Gildas Le Corguillé3
    • Helena Rasche3
    • Nicola Soranzo3
    • Saskia Hiltemann3
    • Mallory Freeberg2
    • Niall Beard2
    • Pratik Jagtap2
    • Timothy J. Griffin2
    • William Durand2
    • Anthony Bretaudeau1
    • James Taylor1
    • Maria Doyle1
    • Marius van den Beek1
    • Mehmet Tekman1
    • Mo Heydarian1
    • Subina Mehta1
    • Show N_FILTERS more
    • Resource type
    • e-learning5
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets5
    • Associated Workflows5
    • Show N_FILTERS more
  • Hide disabled materials
  • Show archived materials
    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month

Training materials

  • Subscribe via email

Email Subscription

Register training material

Tools: HISAT2

and Difficulty level: Beginner

and Include disabled: true

5 materials found
  • e-learning

    Neoantigen 2: Non-Reference-Database-Generation

    • beginner
    Proteomics label-free
  • e-learning

    Neoantigen 2: Non-normal-Database-Generation

    • beginner
    Proteomics label-free
  • e-learning

    1: RNA-Seq reads to counts

    • beginner
    Transcriptomics QC collections mouse
  • e-learning

    Differential abundance testing of small RNAs

    • beginner
    Transcriptomics
  • e-learning

    De novo transcriptome reconstruction with RNA-Seq

    • beginner
    Transcriptomics
Training eSupport System
contact@example.com
Contribute
About TeSS
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.0
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.