Training materials
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and Operations: Somatic variant calling
and Licence: Creative Commons Attribution Share Alike 4.0 International
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Operation
- Somatic variant calling
- Data handling7
- File handling7
- File processing7
- Processing7
- Report handling7
- Utility operation7
- Database retrieval4
- Query4
- Query and retrieval4
- Data extraction3
- Data retrieval3
- Data retrieval (metadata)3
- Data visualisation3
- Metadata retrieval3
- Molecular visualisation3
- Plotting3
- Rendering3
- Retrieval3
- Visualisation3
- Ontology browsing2
- Ontology visualisation2
- Alignment1
- Alignment construction1
- Alignment generation1
- Allele calling1
- Database search1
- Editing1
- Exome variant detection1
- Genome variant detection1
- Germ line variant calling1
- Mutation detection1
- Normalisation1
- Quality control1
- Read pre-processing1
- Search1
- Sequence read pre-processing1
- Standardisation1
- Standardisation and normalisation1
- Validation1
- Variant calling1
- Variant mapping1
- de novo mutation detection1
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Content provider
- Swiss Institute of Bioinformatics1
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Difficulty level
- Beginner1
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- Computer Software1
- workflow1
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