Training materials
Scientific topics: Tool interoperability
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and Operations: RNA-Seq analysis
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Scientific topic
- Tool interoperability
- Biological models1
- Biological networks1
- Biological pathways1
- Cellular process pathways1
- Codon usage1
- DNA chips1
- DNA microarrays1
- Disease pathways1
- Environmental information processing pathways1
- Expression1
- Gene expression1
- Gene expression profiling1
- Gene regulatory networks1
- Gene transcription1
- Gene translation1
- Genetic information processing pathways1
- Interactions1
- Interactome1
- Metabolic pathways1
- MicroRNA sequencing1
- Molecular interactions1
- Molecular interactions, pathways and networks1
- Networks1
- Omics1
- Pathways1
- Pipelines1
- RNA sequencing1
- RNA-Seq1
- RNA-Seq analysis1
- Signal transduction pathways1
- Signaling pathways1
- Small RNA sequencing1
- Small RNA-Seq1
- Small-Seq1
- Software integration1
- Tool integration1
- Transcription1
- Transcriptome profiling1
- WTSS1
- Whole transcriptome shotgun sequencing1
- Workflows1
- miRNA-seq1
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Operation
- RNA-Seq analysis
- Alignment1
- Alignment construction1
- Alignment generation1
- Allele calling1
- Exome variant detection1
- Genome variant detection1
- Germ line variant calling1
- Mutation detection1
- Read pre-processing1
- Sequence read pre-processing1
- Somatic variant calling1
- Variant calling1
- Variant mapping1
- de novo mutation detection1
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Difficulty level
- Beginner1
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- Carpentries style curriculum1
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